RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TGM4P49221 684 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 CEBPDP49716 269 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 IDH3AP50213 366 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 LUMP51884 338 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 CRYBA2P53672 197 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 WDR4P57081 412 aaKnown RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 RPL31P62899 125 aaKnown RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 HIST1H3AP68431 136 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 AANATQ16613 207 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 ANKDD1AQ495B1 522 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 ABCA11PQ4W5N1 156 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 CYBRD1Q53TN4 286 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 TCTEX1D4Q5JR98 221 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 FGD3Q5JSP0 725 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 HIST2H3PS2Q5TEC6 136 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 GPR139Q6DWJ6 353 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 SMARCD3Q6STE5 483 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 EPGNQ6UW88 154 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 C8orf86Q6ZUL3 223 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 HIST2H3AQ71DI3 136 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 FAM122BQ7Z309 247 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 ADCK1Q86TW2 530 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 C11orf53Q8IXP5 236 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 BATF2Q8N1L9 274 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 Q8N2B8 174 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 OR2T27Q8NH04 317 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 OR4K13Q8NH42 304 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 STMN2Q93045 179 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 C12orf43Q96C57 262 aaKnown RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 FOXRED1Q96CU9 486 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 RAB3IPQ96QF0 476 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 NMNAT3Q96T66 252 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 RTL8AQ9BWD3 113 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 KAT8Q9H7Z6 458 aaKnown RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 SSU72Q9NP77 194 aaKnown RBP5.52□□□□□ -1.53
HDAC1-204ENST00000471488 DNAJC27Q9NZQ0 273 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 NLKQ9UBE8 527 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 B9D1Q9UPM9 204 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 SNX13Q9Y5W8 968 aa5.52□□□□□ -1.53
HDAC1-204ENST00000471488 A0A087WUU8 490 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF850A8MQ14 1090 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 SIGLEC5O15389 551 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 TIPRLO75663 272 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 ZFPL1O95159 310 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 PTBP3O95758 552 aaKnown RBP5.51□□□□□ -1.53
HDAC1-204ENST00000471488 ACAA1P09110 424 aaPredicted RBP5.51□□□□□ -1.53
HDAC1-204ENST00000471488 SPARCP09486 303 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 HSD11B1P28845 292 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 CAV3P56539 151 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 FHL1Q13642 323 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 KCNMB1Q16558 191 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF788Q6ZQV5 615 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 TMPRSS11FQ6ZWK6 438 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 MBOAT2Q6ZWT7 520 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 FKBP9P1Q75LS8 142 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 SLC16A9Q7RTY1 509 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 OVCH2Q7RTZ1 564 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 DCXRQ7Z4W1 244 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 KRT77Q7Z794 578 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 VTCN1Q7Z7D3 282 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 ZNF329Q86UD4 541 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 TIGD4Q8IY51 512 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 DPP10Q8N608 796 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 KLHL30-AS1Q8NEE0 82 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 PROKR2Q8NFJ6 384 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 SLC26A10Q8NG04 563 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 OR52H1Q8NGJ2 320 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 OR4C15Q8NGM1 316 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 OR13D1Q8NGV5 346 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 ANGPTL6Q8NI99 470 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 WIPF2Q8TF74 440 aaPredicted RBP5.51□□□□□ -1.53
HDAC1-204ENST00000471488 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.51□□□□□ -1.53
HDAC1-204ENST00000471488 PIGCQ92535 297 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 REEP6Q96HR9 211 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 RSRC1Q96IZ7 334 aaKnown RBP5.51□□□□□ -1.53
HDAC1-204ENST00000471488 RNF170Q96K19 258 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 HIST1H2AAQ96QV6 131 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 CDRT15Q96T59 188 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 IFT27Q9BW83 186 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 MYLK2Q9H1R3 596 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 USE1Q9NZ43 259 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 OR14J1Q9UGF5 321 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 TMEM5Q9Y2B1 443 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 RHBDD3Q9Y3P4 386 aa5.51□□□□□ -1.53
HDAC1-204ENST00000471488 DYNC2H1Q8NCM8 4307 aaKnown RBP5.5□□□□□ -1.53
HDAC1-204ENST00000471488 IGLV1-36A0A0B4J1U3 117 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 PSMB11A5LHX3 300 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 HTR3EA5X5Y0 456 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 UNC119BA6NIH7 251 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 SLC1A7O00341 560 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 SLC22A2O15244 555 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 XRCC2O43543 280 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 RAMP3O60896 148 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 RHBDL1O75783 438 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 PYCR1P32322 319 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 CX3CR1P49238 355 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 THBS3P49746 956 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 SLC25A1P53007 311 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 PRDX4Q13162 271 aa5.5□□□□□ -1.53
HDAC1-204ENST00000471488 CYLC2Q14093 348 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms