RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 RNF138Q8WVD3 245 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR8D1Q8WZ84 308 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 DYRK2Q92630 601 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 RAB8BQ92930 207 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BHQ93079 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 EAF2Q96CJ1 260 aaPredicted RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FLYWCH2Q96CP2 140 aaKnown RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 SEPHS2Q99611 448 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BNQ99877 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BMQ99879 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 RSPO3Q9BXY4 272 aaPredicted RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 C20orf27Q9GZN8 174 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 VN1R1Q9GZP7 353 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ARL6Q9H0F7 186 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 CWH43Q9H720 699 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 UBTD1Q9HAC8 227 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ELOVL3Q9HB03 270 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 GPR35Q9HC97 309 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 AMBNQ9NP70 447 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ACOT13Q9NPJ3 140 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 MMP26Q9NRE1 261 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 PIPOXQ9P0Z9 390 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 GALPQ9UBC7 116 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 SLC23A2Q9UGH3 650 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 RALYQ9UKM9 306 aaKnown RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 TBX21Q9UL17 535 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 CFAP20Q9Y6A4 193 aaKnown RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 PIK3C2AO00443 1686 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ECM29Q5VYK3 1845 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OTOFQ9HC10 1997 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 LTN1O94822 1766 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 IQGAP3Q86VI3 1631 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 USP32Q8NFA0 1604 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 A0A087WUU8 490 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 A0A0D9SG52 128 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TRBV4-1A0A0J9YWV2 114 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 KIR2DS1A0A191URI9 304 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 A0A1W2PRE2 83 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 GAGE12BA1L429 117 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF840PA6NDX5 716 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 FRG2CA6NGY1 282 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 FAM90A8PA6NJQ4 464 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 H7BYZ3 331 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 J3QLI3 93 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TNFRSF11BO00300 401 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 MFNGO00587 321 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TNFSF11O14788 317 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CTDSPLO15194 276 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 HYAL3O43820 417 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 PRAF2O60831 178 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 C1QL1O75973 258 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR2J3O76001 311 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR2A4O95047 310 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 NFATC1O95644 943 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CTSLP07711 333 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 H2AFZP0C0S5 128 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 FAM90A13PP0C7W8 464 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 FAM90A24PP0C7X0 464 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 PSG1P11464 419 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 COX7A2P14406 83 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 EDN2P20800 178 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 USF1P22415 310 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 GATA3P23771 443 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 MPGP29372 298 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CAMPP49913 170 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 EFNA5P52803 228 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 RABGGTBP53611 331 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TMPRSS3P57727 454 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 S100A10P60903 97 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 RPS13P62277 151 aaKnown RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 LSM3P62310 102 aaKnown RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 SRPXP78539 464 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 SLC6A3Q01959 620 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TLE3Q04726 772 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 SMAGPQ0VAQ4 97 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 DHRS2Q13268 280 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 KIR2DS1Q14954 304 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 IAH1Q2TAA2 248 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 MS4A18Q3C1V0 323 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CD300EQ496F6 205 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 RAB6CQ53S08 254 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 CPTPQ5TA50 214 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR10K2Q6IF99 312 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 PWWP2BQ6NUJ5 590 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TEPPQ6URK8 271 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 FAM159AQ6UWV7 190 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 GDPGP1Q6ZNW5 385 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 C19orf35Q6ZS72 473 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 IL17RELQ6ZVW7 336 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 MDGA2Q7Z553 956 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 WDR53Q7Z5U6 358 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 AMIGO3Q86WK7 504 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM173Q86WV6 379 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 STPG4Q8N801 248 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 ARL14EPQ8N8R7 260 aaPredicted RBP4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR4A4PQ8NGN8 299 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR2A12Q8NGT7 310 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR4F5Q8NH21 305 aa4.5□□□□□ -1.69
COL3A1-205ENST00000470167 OR5B3Q8NH48 314 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms