RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 FOXF1Q12946 379 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 IL13RA2Q14627 380 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 FAM189A2Q15884 450 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 HYAL4Q2M3T9 481 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 ACOT6Q3I5F7 207 aaPredicted RBP8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 ITPRIPL2Q3MIP1 535 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 SLC22A6Q4U2R8 563 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 CLLU1OSQ5K130 101 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 SP5Q6BEB4 398 aaPredicted RBP8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 SPSB3Q6PJ21 355 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 DPPA3Q6W0C5 159 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 TMEM182Q6ZP80 229 aaPredicted RBP8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 ZNF765Q7L2R6 523 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 MRPL41Q8IXM3 137 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 CYB561D1Q8N8Q1 229 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 OR5H2Q8NGV7 314 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 OTOSQ8NHW6 89 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 ZCCHC10Q8TBK6 192 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 MRGPRDQ8TDS7 321 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 TMEM170AQ8WVE7 144 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 LMLNQ96KR4 655 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 MIEN1Q9BRT3 115 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 CABLES2Q9BTV7 478 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 FKBP11Q9NYL4 201 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 C14orf166Q9Y224 244 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 POLR3KQ9Y2Y1 108 aaPredicted RBP8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 LSM5Q9Y4Y9 91 aaKnown RBP8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 COLEC10Q9Y6Z7 277 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 COL4A6Q14031 1691 aa8.01□□□□□ -1.13
SMARCE1-207ENST00000469334 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 ZNF860A6NHJ4 632 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 C4orf51C9J302 202 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 C1QL1O75973 258 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 ATXN8OSP0DMR3 200 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 TMEM11P17152 192 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 HNF1AP20823 631 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 TAS2R46P59540 309 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 ROM1Q03395 351 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 SGCGQ13326 291 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 FZD2Q14332 565 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 ZNF266Q14584 549 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 TRMT12Q53H54 448 aaKnown RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 ZNF705AQ6ZN79 300 aaPredicted RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 SMIM15Q7Z3B0 74 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 CATSPERDQ86XM0 798 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 CSNK1A1LQ8N752 337 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 LIPHQ8WWY8 451 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 HIST1H2AAQ96QV6 131 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 ELOVL3Q9HB03 270 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 WFDC1Q9HC57 220 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 MSL2Q9HCI7 577 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 DNAJC4Q9NNZ3 241 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 DNAJB12Q9NXW2 375 aaKnown RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 NAGKQ9UJ70 344 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 HHLA2Q9UM44 414 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 HIF3AQ9Y2N7 669 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 DCDC2BA2VCK2 349 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 CA11O75493 328 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 IRF2P14316 349 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 HSD11B1P28845 292 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 GJA4P35212 333 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 BCL6P41182 706 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 GRK6P43250 576 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 KLF3P57682 345 aaPredicted RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 BTG2P78543 158 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 QRFPP83859 136 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 PRDX1Q06830 199 aaKnown RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 TRA2AQ13595 282 aaKnown RBP eCLIP8□□□□□ -1.131e-7■□□□□ 8.1
SMARCE1-207ENST00000469334 PMS2P11Q13670 270 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 ENPP2Q13822 863 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 PCK2Q16822 640 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 FHL5Q5TD97 284 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 DPY19L4Q7Z388 723 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 NUFIP2Q7Z417 695 aaKnown RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 FAM160A2Q8N612 972 aaPredicted RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 OR1N1Q8NGS0 311 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 NKD1Q969G9 470 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 OR2J1Q9GZK6 312 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 SH3BGRL3Q9H299 93 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 C6orf106Q9H6K1 298 aaPredicted RBP8□□□□□ -1.13
SMARCE1-207ENST00000469334 LIPGQ9Y5X9 500 aa8□□□□□ -1.13
SMARCE1-207ENST00000469334 NPIPA5A0A0B4J1W7 369 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 C20orf202A1L168 122 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 CDC14CA4D256 554 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 A8MVM7 634 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 NPIPA7E9PJI5 369 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 HCRTR2O43614 444 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 TIMP1P01033 207 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 ISG15P05161 165 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 UMODP07911 640 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 NPIPA8P0DM63 369 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 TMEM225BP0DP42 221 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 ALDH3B1P43353 468 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 OR3A2P47893 321 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 CDK3Q00526 305 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 SP3Q02447 781 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 SMAD4Q13485 552 aaKnown RBP7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 OR5I1Q13606 314 aa7.99□□□□□ -1.13
SMARCE1-207ENST00000469334 NKAIN1Q4KMZ8 207 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms