RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PNLIPRP3Q17RR3 467 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 C1orf185Q5T7R7 199 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 TMEM42Q69YG0 159 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 RTL6Q6ICC9 239 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 INO80CQ6PI98 192 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-205ENST00000469129 BTN2A1Q7KYR7 527 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 GCNT2Q8N0V5 402 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 C17orf78Q8N4C9 275 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 RBMXL3Q8N7X1 1067 aaKnown RBP8.11□□□□□ -1.11
SMC1A-205ENST00000469129 CNEP1R1Q8N9A8 125 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 C9orf106Q8NAJ2 232 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 ACBD4Q8NC06 268 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 OR5M9Q8NGP3 310 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 OR10R2Q8NGX6 335 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 GPX8Q8TED1 209 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 UBASH3BQ8TF42 649 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 NPRL2Q8WTW4 380 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 TNFAIP8L1Q8WVP5 186 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 HPS1Q92902 700 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 GCDHQ92947 438 aaPredicted RBP8.11□□□□□ -1.11
SMC1A-205ENST00000469129 PIGTQ969N2 578 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 BOD1Q96IK1 185 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 CACNG6Q9BXT2 260 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 HRASLSQ9HDD0 168 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 OBP2BQ9NPH6 170 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 PCDHB16Q9NRJ7 776 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 GPR173Q9NS66 373 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 NUDT15Q9NV35 164 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 B3GNT2Q9NY97 397 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 PROCRQ9UNN8 238 aa8.11□□□□□ -1.11
SMC1A-205ENST00000469129 LOC100509620A0A075B734 347 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 HMX3A6NHT5 357 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 BOLA2-SMG1P6H3BVE0 249 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 PRAF2O60831 178 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 CCNKO75909 580 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 MPIG6BO95866 241 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 CYB5AP00167 134 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 TPOP07202 933 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 NAT2P11245 290 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 GTF2F2P13984 249 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 CCNOP22674 350 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 CPT2P23786 658 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ACKR3P25106 362 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 GIFP27352 417 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 PTGFRP43088 359 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 CBX5P45973 191 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 FUT6P51993 359 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 FOXG1P55316 489 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 MTCP1P56278 107 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 RAB25P57735 213 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 RPS27AP62979 156 aaKnown RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF92Q03936 586 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ZMYND11Q15326 602 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 UBE2V2Q15819 145 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 HIKESHIQ53FT3 197 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 PLCXD3Q63HM9 321 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF585AQ6P3V2 769 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 UNQ6126/PRO20091Q6UXV3 157 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 Q6ZTK2 550 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 MDP1Q86V88 176 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF584Q8IVC4 421 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 GABRG1Q8N1C3 465 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 PAQR4Q8N4S7 273 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 TMEM229BQ8NBD8 167 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 CHST4Q8NCG5 386 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 SLC30A7Q8NEW0 376 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 OR56B4Q8NH76 319 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 AQP3Q92482 292 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 POM121L2Q96KW2 1035 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 C1orf147Q96MC9 270 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 SPACA5Q96QH8 159 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 NKX3-1Q99801 234 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 METTL9Q9H1A3 318 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 LPAR5Q9H1C0 372 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 C20orf85Q9H1P6 137 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 CDH20Q9HBT6 801 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 NOX3Q9HBY0 568 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 KLK11Q9UBX7 282 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ZNF221Q9UK13 617 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ING4Q9UNL4 249 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ALG5Q9Y673 324 aa8.1□□□□□ -1.11
SMC1A-205ENST00000469129 URB1O60287 2271 aaKnown RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 ANKRD11Q6UB99 2663 aaPredicted RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 INTS1Q8N201 2190 aaKnown RBP8.1□□□□□ -1.11
SMC1A-205ENST00000469129 PKD1L2Q7Z442 2459 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 LAMA5O15230 3695 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 RAB27BO00194 218 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 GMDSO60547 372 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 ICMTO60725 284 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 RAD51DO75771 328 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 IL2RAP01589 272 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 CSTBP04080 98 aaKnown RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 PDGFAP04085 211 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 H2AFB2P0C5Z0 115 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 MGMTP16455 207 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 TBPP20226 339 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 PSMB1P20618 241 aaKnown RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 IGHV1-2P23083 117 aa8.09□□□□□ -1.11
SMC1A-205ENST00000469129 KIR2DL2P43627 348 aaPredicted RBP8.09□□□□□ -1.11
SMC1A-205ENST00000469129 VEGFCP49767 419 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms