RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PCSK4Q6UW60 755 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 RNF144BQ7Z419 303 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-208ENST00000468300 DNAAF1Q8NEP3 725 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 OR1J2Q8NGS2 313 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 OR1F12Q8NHA8 337 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 OR51E1Q8TCB6 317 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 NIPAL2Q9H841 368 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 MLXQ9UH92 298 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 TIMM10BQ9Y5J6 103 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 PIEZO1Q92508 2521 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 CLDN25C9JDP6 229 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 BET1O15155 118 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 HPGDSO60760 199 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 ARL6IP5O75915 188 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 HLA-HP01893 362 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 CD3GP09693 182 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 UBCP0CG48 685 aaKnown RBP7.18□□□□□ -1.26
BRCA1-208ENST00000468300 FSTP19883 344 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 MPGP29372 298 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 SLAQ13239 276 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 HIKESHIQ53FT3 197 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 SLC16A14Q7RTX9 510 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 MYPOPQ86VE0 399 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-208ENST00000468300 DMRTC2Q8IXT2 367 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF100Q8IYN0 542 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 OR51A2Q8NGJ7 313 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 OR5H6Q8NGV6 325 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 FAM57AQ8TBR7 257 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 SSX3Q99909 188 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 PLEK2Q9NYT0 353 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 CMAHPQ9Y471 501 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 PEX16Q9Y5Y5 336 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 KALRNO60229 2985 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 NCOR2Q9Y618 2525 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 A6NIN4 97 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 COX5AP20674 150 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 MYL9P24844 172 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 HSD11B1P28845 292 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 PLA2G7Q13093 441 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 PABPC1L2AQ5JQF8 200 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 COLCA1Q6ZS62 124 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 FAM57BQ71RH2 274 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 SSX9Q7RTT3 188 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 BIVMQ86UB2 503 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 GABRG1Q8N1C3 465 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 SSC4DQ8WTU2 575 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 HPS1Q92902 700 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 SLC25A28Q96A46 364 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 NKX3-1Q99801 234 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-208ENST00000468300 HDHD2Q9H0R4 259 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 MOB1AQ9H8S9 216 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 TAS2R4Q9NYW5 299 aa7.18□□□□□ -1.26
BRCA1-208ENST00000468300 TRAV34A0A0B4J273 112 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 IFITM5A6NNB3 132 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 F5H5K5 113 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 TEX46H3BTG2 121 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 WRBO00258 174 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 LIPFP07098 398 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 CD300CQ08708 224 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 IDNKQ5T6J7 187 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 STEAP3Q658P3 488 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 VHLLQ6RSH7 139 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 FAM180AQ6UWF9 173 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 Q6ZT83 130 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 CD163Q86VB7 1156 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 DOLPP1Q86YN1 238 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 OR14K1Q8NGZ2 314 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 SLC22A4Q9H015 551 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 PLGRKTQ9HBL7 147 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 ASF1BQ9NVP2 202 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 UPB1Q9UBR1 384 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 HHLA2Q9UM44 414 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 V9GYS6 101 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 CHD8Q9HCK8 2581 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 A0A0U1RQV5 110 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 M0R135 149 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 GMDSO60547 372 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 KRT33AO76009 404 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 CEACAM8P31997 349 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-208ENST00000468300 GUCA1AP43080 201 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-208ENST00000468300 TMEM244Q5VVB8 128 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 ANKRD16Q6P6B7 361 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 C3P1Q6ZMU1 363 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 P4HA3Q7Z4N8 544 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 LUZP2Q86TE4 346 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 TMEM200AQ86VY9 491 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 UBE2J2Q8N2K1 259 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF433Q8N7K0 673 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-208ENST00000468300 OR6K3Q8NGY3 331 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 WFDC12Q8WWY7 111 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 ZCCHC14Q8WYQ9 949 aaKnown RBP7.17□□□□□ -1.26
BRCA1-208ENST00000468300 ZNF799Q96GE5 643 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 GPR84Q9NQS5 396 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 FOXJ3Q9UPW0 622 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 DHDHQ9UQ10 334 aa7.17□□□□□ -1.26
BRCA1-208ENST00000468300 AIPO00170 330 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 WDR1O75083 606 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 MAS1P04201 325 aa7.16□□□□□ -1.26
BRCA1-208ENST00000468300 CLEC3BP05452 202 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms