RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 MITFO75030 526 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-207ENST00000467985 ALPLP05186 524 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 IGHV4-38-2P0DP08 117 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 CFHR2P36980 270 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 FGF12P61328 243 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 BAMBIQ13145 260 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 OGFRL1Q5TC84 451 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-207ENST00000467985 FAM90A1Q86YD7 464 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 BCL6BQ8N143 479 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-207ENST00000467985 PACRGLQ8N7B6 248 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 PNLDC1Q8NA58 520 aaKnown RBP15.86■□□□□ 0.13
COL7A1-207ENST00000467985 ASB17Q8WXJ9 295 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 ITPKCQ96DU7 683 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 RTL8AQ9BWD3 113 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 MROQ9BYG7 248 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 CTSZQ9UBR2 303 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 KLHDC2Q9Y2U9 406 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 LRP12Q9Y561 859 aa15.86■□□□□ 0.13
COL7A1-207ENST00000467985 PKD1L1Q8TDX9 2849 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 TRAV40A0A0B4J280 105 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 DNAJC9-AS1A6NH13 148 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 TMEM210A6NLX4 147 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 C22orf46C9J442 243 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 CLDN34H7C241 214 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 ZNF254O75437 659 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 ECDO95905 644 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-207ENST00000467985 CST4P01036 141 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 GYPAP02724 150 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 HOXA4Q00056 320 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-207ENST00000467985 PTGES3Q15185 160 aaKnown RBP15.85■□□□□ 0.13
COL7A1-207ENST00000467985 GPR157Q5UAW9 335 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 WDR86Q86TI4 376 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 C11orf53Q8IXP5 236 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 LRRC29Q8WV35 223 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 SLC25A28Q96A46 364 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 C12orf43Q96C57 262 aaKnown RBP15.85■□□□□ 0.13
COL7A1-207ENST00000467985 SLC29A1Q99808 456 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 TLNRD1Q9H1K6 362 aa15.85■□□□□ 0.13
COL7A1-207ENST00000467985 A0A0U1RQV5 110 aa15.84■□□□□ 0.13
COL7A1-207ENST00000467985 ZNF879B4DU55 563 aa15.84■□□□□ 0.13
COL7A1-207ENST00000467985 DCTDP32321 178 aa15.84■□□□□ 0.13
COL7A1-207ENST00000467985 ROM1Q03395 351 aa15.84■□□□□ 0.13
COL7A1-207ENST00000467985 PRDX4Q13162 271 aa15.84■□□□□ 0.13
COL7A1-207ENST00000467985 ZIK1Q3SY52 487 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-207ENST00000467985 WDR82Q6UXN9 313 aa15.84■□□□□ 0.13
COL7A1-207ENST00000467985 OR8B12Q8NGG6 310 aa15.84■□□□□ 0.13
COL7A1-207ENST00000467985 IGHV3OR16-10A0A075B7F0 116 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 P2RY10O00398 339 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 DVL1O14640 695 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 CDIPTO14735 213 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 TMPRSS2O15393 492 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 HKR1P10072 659 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 ACKR3P25106 362 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 MAP2K3P46734 347 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 CSNK2BP67870 215 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 FOXL1Q12952 345 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 SLC36A1Q7Z2H8 476 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 OR10Z1Q8NGY1 313 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 FAM81AQ8TBF8 368 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 OR5P3Q8WZ94 311 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 ZNF48Q96MX3 618 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-207ENST00000467985 HIST1H2AAQ96QV6 131 aa15.83■□□□□ 0.12
COL7A1-207ENST00000467985 SMPD3Q9NY59 655 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-207ENST00000467985 H2AFY2Q9P0M6 372 aaPredicted RBP15.83■□□□□ 0.12
COL7A1-207ENST00000467985 IGHV3OR15-7A0A075B7D8 119 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 TMEM269A0A1B0GVZ9 245 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 CCDC182A6NF36 153 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 ZNF850A8MQ14 1090 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 SRRM5B3KS81 715 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 TOX4O94842 621 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 RNASE1P07998 156 aaKnown RBP15.82■□□□□ 0.12
COL7A1-207ENST00000467985 MRPL3P09001 348 aaKnown RBP15.82■□□□□ 0.12
COL7A1-207ENST00000467985 ATP6V1B1P15313 513 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 EGR1P18146 543 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 HCCSP53701 268 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 ZNF829Q3KNS6 432 aaPredicted RBP15.82■□□□□ 0.12
COL7A1-207ENST00000467985 FAM76BQ5HYJ3 339 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 METTL11BQ5VVY1 283 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 MEPCEQ7L2J0 689 aaKnown RBP15.82■□□□□ 0.12
COL7A1-207ENST00000467985 KRT74Q7RTS7 529 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 ZDHHC23Q8IYP9 409 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 ZNF679Q8IYX0 411 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 ZNF555Q8NEP9 628 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 PIGCQ92535 297 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 LYZL4Q96KX0 146 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 CNN2Q99439 309 aaKnown RBP15.82■□□□□ 0.12
COL7A1-207ENST00000467985 MNTQ99583 582 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 PCGF1Q9BSM1 259 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 GABARAPL3Q9BY60 117 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 SMURF1Q9HCE7 757 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 FAM206AQ9NX38 181 aa15.82■□□□□ 0.12
COL7A1-207ENST00000467985 ZNF816-ZNF321PA0A0X1KG74 233 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 SLC22A31A6NKX4 558 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 GPR37O15354 613 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 PRKYO43930 277 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 PDCD1Q15116 288 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 SLC9A3R2Q15599 337 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 AWAT1Q58HT5 328 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 SLX4IPQ5VYV7 408 aa15.81■□□□□ 0.12
COL7A1-207ENST00000467985 NXNL2Q5VZ03 156 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms