RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 GHSRQ92847 366 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 C14orf79Q96F83 325 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 PGAM5Q96HS1 289 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 PBOV1Q9GZY1 135 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 RGCCQ9H4X1 137 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 ST6GALNAC2Q9UJ37 374 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
DDX56-208ENST00000467318 ABCA4P78363 2273 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 A0A0U1RQV5 110 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 NOTOA8MTQ0 251 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 PDCD5O14737 125 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 CTAG2O75638 210 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 ALKBH1Q13686 389 aaKnown RBP12.69□□□□□ -0.38
DDX56-208ENST00000467318 SNAI3Q3KNW1 292 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 ZNF672Q499Z4 452 aaPredicted RBP12.69□□□□□ -0.38
DDX56-208ENST00000467318 RGS7BPQ6MZT1 257 aaPredicted RBP12.69□□□□□ -0.38
DDX56-208ENST00000467318 RFPL4BQ6ZWI9 263 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 CATSPERDQ86XM0 798 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 ELMOD2Q8IZ81 293 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 UBASH3BQ8TF42 649 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 SMIM19Q96E16 107 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 PGLYRP3Q96LB9 341 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 C7orf50Q9BRJ6 194 aaKnown RBP12.69□□□□□ -0.38
DDX56-208ENST00000467318 THAP7Q9BT49 309 aaPredicted RBP12.69□□□□□ -0.38
DDX56-208ENST00000467318 MRI1Q9BV20 369 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 OR51B6Q9H340 312 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 OPA3Q9H6K4 179 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 SLA2Q9H6Q3 261 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 G6PC2Q9NQR9 355 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 ING3Q9NXR8 418 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 GTF2A1LQ9UNN4 478 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 STARD10Q9Y365 291 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 ATP23Q9Y6H3 246 aa12.69□□□□□ -0.38
DDX56-208ENST00000467318 ZNF879B4DU55 563 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 E9PI62 339 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 PLAUP00749 431 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 ERP29P30040 261 aaKnown RBP12.68□□□□□ -0.38
DDX56-208ENST00000467318 THBS2P35442 1172 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 PSMB10P40306 273 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 IFITM2Q01629 132 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 MFGE8Q08431 387 aaPredicted RBP12.68□□□□□ -0.38
DDX56-208ENST00000467318 INSL4Q14641 139 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 CDK5R1Q15078 307 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 CDK10Q15131 360 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 ZNF718Q3SXZ3 478 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 BCL2L15Q5TBC7 163 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 UNQ9370/PRO34162Q6UXP9 181 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 SAMD12Q8N8I0 201 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 OR8B12Q8NGG6 310 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
DDX56-208ENST00000467318 TMEM171Q8WVE6 324 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
DDX56-208ENST00000467318 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
DDX56-208ENST00000467318 FRRS1LQ9P0K9 344 aa12.68□□□□□ -0.38
DDX56-208ENST00000467318 INMT-MINDY4F8WBC2 141 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 DHFRP00374 187 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 TTRP02766 147 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 UCHL1P09936 223 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 APOBEC3AP31941 199 aaPredicted RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 NKX2-5P52952 324 aaPredicted RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 SELENOVP59797 346 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 TATDN3Q17R31 274 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 WDR38Q5JTN6 314 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 MBNL2Q5VZF2 373 aaKnown RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 FBXW12Q6X9E4 464 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 PRSS35Q8N3Z0 413 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 OR4M1Q8NGD0 313 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 SLC25A40Q8TBP6 338 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 AKAP1Q92667 903 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX56-208ENST00000467318 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 MARS2Q96GW9 593 aaKnown RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 OR2J1Q9GZK6 312 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 COPZ2Q9P299 210 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 ZNF319Q9P2F9 582 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 NLKQ9UBE8 527 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 PTPN13Q12923 2485 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 A0A0G2JK05 382 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 TRBV2A0A0J9YWF9 115 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 TMEM212A6NML5 194 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 E7EQL1 145 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 UBCP0CG48 685 aaKnown RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 RAC2P15153 192 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 ZNF250P15622 560 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 GCH1P30793 250 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 THBS4P35443 961 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 NANOS3P60323 173 aaKnown RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 TLE4Q04727 773 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 GK2Q14410 553 aaPredicted RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 HSD17B12Q53GQ0 312 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 VHLLQ6RSH7 139 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 PGAP1Q75T13 922 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 CDH24Q86UP0 819 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 ASCC1Q8N9N2 400 aaKnown RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 LILRB1Q8NHL6 650 aaPredicted RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 RPS4Y2Q8TD47 263 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 KLF14Q8TD94 323 aaPredicted RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 FBXW5Q969U6 566 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 SGK3Q96BR1 496 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 REEP6Q96HR9 211 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms