RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 CPOQ8IVL8 374 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 TIGD4Q8IY51 512 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 BHLHE23Q8NDY6 225 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 GJC3Q8NFK1 279 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 OR2T33Q8NG76 320 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 OR10AD1Q8NGE0 317 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 OR6K6Q8NGW6 343 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 CLDND2Q8NHS1 167 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 RDH5Q92781 318 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 POP5Q969H6 163 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 HAVCR1Q96D42 359 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ZMYND19Q96E35 227 aaPredicted RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 DUS3LQ96G46 650 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 SIGLEC11Q96RL6 698 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 PITX2Q99697 317 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 COQ7Q99807 217 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ATF6BQ99941 703 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 PKP2Q99959 881 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 C1QTNF5Q9BXJ0 243 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 NDEL1Q9GZM8 345 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 MS4A7Q9GZW8 240 aaPredicted RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 HDHD2Q9H0R4 259 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 MARCH7Q9H992 704 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 ELOVL3Q9HB03 270 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 YAE1D1Q9NRH1 226 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 KCNG2Q9UJ96 466 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 PURGQ9UJV8 347 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 POLR1DQ9Y2S0 133 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 AP4S1Q9Y587 144 aa4.03□□□□□ -1.76
EXOSC3-204ENST00000465860 IGHV1-69-2A0A0G2JMI3 117 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 A0A1B0GWJ7 208 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SAC3D1A6NKF1 404 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 RIIAD1A6NNX1 92 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 A8MV72 311 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 E9PQ18 207 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 F5H5P2 479 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 M0R135 149 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 NDUFS8O00217 210 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 PSMD9O00233 223 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 MAGEB4O15481 346 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 PPIHO43447 177 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 TIMM8AO60220 97 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CRLF1O75462 422 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 GLCEO94923 617 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 TGFAP01135 160 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 MRPL3P09001 348 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SPARCP09486 303 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CSF3P09919 207 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ANXA8P13928 327 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ACHEP22303 614 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 FMO3P31513 532 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 NAA10P41227 235 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ENTPD1P49961 510 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 PRKXP51817 358 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ACTR3P61158 418 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SEC61A1P61619 476 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 MAB21L1Q13394 359 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 APOFQ13790 326 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 EIF2B1Q14232 305 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 PTGES3Q15185 160 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 KLHL12Q53G59 568 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 DMRTC1Q5HYR2 192 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 FAM201AQ5SY85 155 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 GLYATL3Q5SZD4 288 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 C1orf146Q5VVC0 180 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CYB5R2Q6BCY4 276 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SLC27A4Q6P1M0 643 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 PRSS45Q7RTY3 260 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ERI1Q8IV48 349 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ATG16L2Q8NAA4 619 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 C19orf18Q8NEA5 215 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OR8G5Q8NG78 346 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OR2Z1Q8NG97 314 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OR2AJ1Q8NGZ0 328 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OR2T4Q8NH00 348 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OR5K1Q8NHB7 308 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 PPP1R35Q8TAP8 253 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF420Q8TAQ5 688 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 TEX47Q8TBZ9 253 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 RNF133Q8WVZ7 376 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ITLN1Q8WWA0 313 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CCL17Q92583 94 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 APOBEC3DQ96AK3 386 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OTULINQ96BN8 352 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SLAMF6Q96DU3 332 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ZNF799Q96GE5 643 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OR2V2Q96R30 315 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CIB1Q99828 191 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ABHD6Q9BV23 337 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 TTTY10Q9BZA0 68 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 OR51V1Q9H2C8 321 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CHODLQ9H9P2 273 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 ZMAT3Q9HA38 289 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SAP30LQ9HAJ7 183 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 LPAR2Q9HBW0 351 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SLC25A19Q9HC21 320 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 CENPMQ9NSP4 180 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 DDX28Q9NUL7 540 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 SLCO1C1Q9NYB5 712 aa4.02□□□□□ -1.77
EXOSC3-204ENST00000465860 NKIRAS2Q9NYR9 191 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms