RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FAM89BQ8N5H3 189 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 PNLDC1Q8NA58 520 aaKnown RBP17.44■□□□□ 0.38
SDF4-205ENST00000465727 FOXQ1Q9C009 403 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 OR8D2Q9GZM6 311 aa17.44■□□□□ 0.38
SDF4-205ENST00000465727 PNO1Q9NRX1 252 aaKnown RBP17.44■□□□□ 0.38
SDF4-205ENST00000465727 E5RGE8 158 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 H0YIG0 161 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 NME2P1O60361 137 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 TSPAN2O60636 221 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 DAOP14920 347 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 LMO1P25800 156 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 PTGER4P35408 488 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 HSD11B2P80365 405 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 HHEXQ03014 270 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 ARL6IP1Q15041 203 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 TMEM151BQ8IW70 566 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 SGPP2Q8IWX5 399 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 TCTN2Q96GX1 697 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 YPEL4Q96NS1 127 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 GAL3ST4Q96RP7 486 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 PFDN5Q99471 154 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 C20orf24Q9BUV8 137 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 OR10A2Q9H208 303 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 C19orf12Q9NSK7 152 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 NSG2Q9Y328 171 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 MMACHCQ9Y4U1 282 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 WISP1O95388 367 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 ARG1P05089 322 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 OR3A4PP47883 348 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 P2RY1P47900 373 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 CLINT1Q14677 625 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 RTL6Q6ICC9 239 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 ST6GALNAC5Q9BVH7 336 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 BANF2Q9H503 90 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 PISDQ9UG56 409 aa17.43■□□□□ 0.38
SDF4-205ENST00000465727 COL5A1P20908 1838 aaPredicted RBP17.42■□□□□ 0.38
SDF4-205ENST00000465727 A0A1W2PPE2 198 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 MS4A18H0YCH9 400 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 SDCBPO00560 298 aaPredicted RBP17.42■□□□□ 0.38
SDF4-205ENST00000465727 CRTAPO75718 401 aaPredicted RBP17.42■□□□□ 0.38
SDF4-205ENST00000465727 KNG1P01042 644 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 CHATP28329 748 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 EIF3IQ13347 325 aaKnown RBP17.42■□□□□ 0.38
SDF4-205ENST00000465727 COL19A1Q14993 1142 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 MS4A18Q3C1V0 323 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 CHRFAM7AQ494W8 412 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 NCMAPQ5T1S8 102 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 OR51E1Q8TCB6 317 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 GPR119Q8TDV5 335 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 SLC25A43Q8WUT9 341 aaPredicted RBP17.42■□□□□ 0.38
SDF4-205ENST00000465727 SMIM3Q9BZL3 60 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 OR11A1Q9GZK7 315 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 HDGFL3Q9Y3E1 203 aa17.42■□□□□ 0.38
SDF4-205ENST00000465727 ARID1BQ8NFD5 2236 aaPredicted RBP17.42■□□□□ 0.38
SDF4-205ENST00000465727 A0A1W2PQF6 199 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 SERPINE3A8MV23 424 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 TMEM150CB9EJG8 249 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 NDUFS6O75380 124 aaKnown RBP17.41■□□□□ 0.38
SDF4-205ENST00000465727 CA11O75493 328 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 S100A2P29034 98 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 AKT2P31751 481 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 DEFA6Q01524 100 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 KIAA0141Q14154 515 aaPredicted RBP17.41■□□□□ 0.38
SDF4-205ENST00000465727 PPA1Q15181 289 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 GPR157Q5UAW9 335 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 SFTPA2Q8IWL1 248 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 CD300LFQ8TDQ1 290 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 ZNF721Q8TF20 911 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 GNRHR2Q96P88 292 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 NRSN2Q9GZP1 204 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 C5orf67F2Z3F1 127 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 OR2C1O95371 312 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 CTSDP07339 412 aaPredicted RBP17.41■□□□□ 0.38
SDF4-205ENST00000465727 HOXB2P14652 356 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 DHPSP49366 369 aaPredicted RBP17.41■□□□□ 0.38
SDF4-205ENST00000465727 RPS23P62266 143 aaKnown RBP17.41■□□□□ 0.38
SDF4-205ENST00000465727 PLCXD2Q0VAA5 305 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 HLA-DQA1Q5Y7H0 255 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 Q6ZSR6 202 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 SULF2Q8IWU5 870 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 LRRC18Q8N456 261 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 C11orf40Q8WZ69 217 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 C5orf34Q96MH7 638 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 SPACA5Q96QH8 159 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 PLA2G2FQ9BZM2 168 aa17.41■□□□□ 0.38
SDF4-205ENST00000465727 LSM5Q9Y4Y9 91 aaKnown RBP17.41■□□□□ 0.38
SDF4-205ENST00000465727 IGKV1D-43A0A0B4J1Z2 117 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 LINC01553A4QN01 128 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 C17orf51A8MQB3 221 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 HCKP08631 526 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 NME1P15531 152 aaKnown RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 COL9A1P20849 921 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 GGNBP1Q5YKI7 109 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 H1FNTQ75WM6 255 aaPredicted RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 METTL27Q8N6F8 245 aaPredicted RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 OR10S1Q8NGN2 331 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 ERGIC1Q969X5 290 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 CHST5Q9GZS9 411 aa17.4■□□□□ 0.38
SDF4-205ENST00000465727 PARP12Q9H0J9 701 aaKnown RBP17.4■□□□□ 0.38
SDF4-205ENST00000465727 UNKLQ9H9P5 680 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms