RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 KCTD18Q6PI47 426 aaPredicted RBP18.07■□□□□ 0.48
LIME1-203ENST00000465591 DOK3Q7L591 496 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 ZNF679Q8IYX0 411 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 PIGCQ92535 297 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 RPL3LQ92901 407 aaKnown RBP18.07■□□□□ 0.48
LIME1-203ENST00000465591 JMJD8Q96S16 334 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 PKP2Q99959 881 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 MICU1Q9BPX6 476 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 PRRG3Q9BZD7 231 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 ERVK-18Q9QC07 812 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 MPC1Q9Y5U8 109 aa18.07■□□□□ 0.48
LIME1-203ENST00000465591 SRSF10O75494 262 aaKnown RBP18.06■□□□□ 0.48
LIME1-203ENST00000465591 PLATP00750 562 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 IGLV3-1P01715 115 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 AMY2BP19961 511 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 NPY4RP50391 375 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 IL5RAQ01344 420 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 KPNB1Q14974 876 aaKnown RBP18.06■□□□□ 0.48
LIME1-203ENST00000465591 DMRTC1Q5HYR2 192 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 SLC35F2Q8IXU6 374 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 PYDC1Q8WXC3 89 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 CENPNQ96H22 339 aaPredicted RBP18.06■□□□□ 0.48
LIME1-203ENST00000465591 DUX5Q96PT3 197 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 APOL4Q9BPW4 351 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 MROQ9BYG7 248 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 PBOV1Q9GZY1 135 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 TRIM36Q9NQ86 728 aa18.06■□□□□ 0.48
LIME1-203ENST00000465591 A0A0U1RQV5 110 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 SAC3D1A6NKF1 404 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 ANXA2P2A6NMY6 339 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 SRRM5B3KS81 715 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 NDUFA2O43678 99 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 ENSAO43768 121 aaKnown RBP18.05■□□□□ 0.48
LIME1-203ENST00000465591 DCTDP32321 178 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 CFHR2P36980 270 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 CXCR4P61073 352 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 ACTG1P63261 375 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 WDR38Q5JTN6 314 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 ZNF322Q6U7Q0 402 aaPredicted RBP18.05■□□□□ 0.48
LIME1-203ENST00000465591 PLEKHG7Q6ZR37 379 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 FTMTQ8N4E7 242 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 OR51E1Q8TCB6 317 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 ASB17Q8WXJ9 295 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 CCL13Q99616 98 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 RTL8AQ9BWD3 113 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 WDR13Q9H1Z4 485 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 GPR84Q9NQS5 396 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 KAAG1Q9UBP8 84 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 ZNF391Q9UJN7 358 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 IKZF2Q9UKS7 526 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 TMEM14AQ9Y6G1 99 aa18.05■□□□□ 0.48
LIME1-203ENST00000465591 TMEM89A2RUT3 159 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 ACOD1A6NK06 481 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 SLC22A31A6NKX4 558 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 DVL1O14640 695 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 ZNF254O75437 659 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 SFTPBP07988 381 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 RIDAP52758 137 aaKnown RBP18.04■□□□□ 0.48
LIME1-203ENST00000465591 GMFBP60983 142 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 SNCBQ16143 134 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 FAM76BQ5HYJ3 339 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 ZFP1Q6P2D0 407 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 KRT74Q7RTS7 529 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 SSX6Q7RTT6 188 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 ZDHHC23Q8IYP9 409 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 SCCPDHQ8NBX0 429 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 RNF170Q96K19 258 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 FAM71F1Q96KD3 344 aaPredicted RBP18.04■□□□□ 0.48
LIME1-203ENST00000465591 OSBPL10Q9BXB5 764 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 GABARAPL3Q9BY60 117 aa18.04■□□□□ 0.48
LIME1-203ENST00000465591 MS4A7Q9GZW8 240 aaPredicted RBP18.04■□□□□ 0.48
LIME1-203ENST00000465591 H2AFY2Q9P0M6 372 aaPredicted RBP18.04■□□□□ 0.48
LIME1-203ENST00000465591 NUFIP1Q9UHK0 495 aaKnown RBP18.04■□□□□ 0.48
LIME1-203ENST00000465591 ZNF816-ZNF321PA0A0X1KG74 233 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 MDFIC2A0A1B0GVS7 189 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 DNAJC9-AS1A6NH13 148 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 TMPRSS2O15393 492 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 TTRP02766 147 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 TFF1P04155 84 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 MMP9P14780 707 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 MICBQ29980 383 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 CEP78Q5JTW2 689 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 C12orf54Q6X4T0 127 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 BRD3OSQ6XYD6 125 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 C9orf139Q6ZV77 190 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 FAM216BQ8N7L0 139 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 OR5T2Q8NGG2 359 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 OR51G2Q8NGK0 314 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 FAM81AQ8TBF8 368 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 TBX15Q96SF7 602 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 RIBC2Q9H4K1 309 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 CLN6Q9NWW5 311 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 HAO2Q9NYQ3 351 aa18.03■□□□□ 0.48
LIME1-203ENST00000465591 MRM2Q9UI43 246 aaKnown RBP18.03■□□□□ 0.48
LIME1-203ENST00000465591 TMEM210A6NLX4 147 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 H3BNX3 289 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 APOL3O95236 402 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 SELLP14151 372 aa18.02■□□□□ 0.48
LIME1-203ENST00000465591 MUC1P15941 1255 aaPredicted RBP18.02■□□□□ 0.48
LIME1-203ENST00000465591 MAP2K3P46734 347 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms