RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 CCL1P22362 96 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 IL2RGP31785 369 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 HSPA13P48723 471 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 GZMKP49863 264 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 ETV1P50549 477 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 CCR9P51686 369 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 NANOS3P60323 173 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 ST3GAL4Q11206 333 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 MRPL28Q13084 256 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 Q71RC1 249 aaPredicted RBP12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 C1orf87Q8N0U7 546 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 CCDC54Q8NEL0 328 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 OR5P3Q8WZ94 311 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 CHCHD3Q9NX63 227 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 CNOT2Q9NZN8 540 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 PSORS1C1Q9UIG5 152 aa12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 EXOSC1Q9Y3B2 195 aaKnown RBP12.22□□□□□ -0.45
SQSTM1-205ENST00000464493 A6NLC8 198 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 H3BSH0 61 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 IGHV2-70P01814 119 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 ISG15P05161 165 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 PIPP12273 146 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 MYF6P23409 242 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 VHLP40337 213 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 GBX2P52951 348 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 LMO4P61968 165 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 BTG1P62324 171 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 CSNK2BP67870 215 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 MED21Q13503 144 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 ALKBH1Q13686 389 aaKnown RBP12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 CEACAM21Q3KPI0 293 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 CEP78Q5JTW2 689 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 C6orf141Q5SZD1 244 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 TMEM244Q5VVB8 128 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 TMPRSS11AQ6ZMR5 421 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 MOB3CQ70IA8 216 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 LRRC28Q86X40 367 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 RDH10Q8IZV5 341 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 OR1M1Q8NGA1 313 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 HAVCR2Q8TDQ0 301 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 RNF170Q96K19 258 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 RTL8AQ9BWD3 113 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 ANKRD60Q9BZ19 345 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 C1orf123Q9NWV4 160 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 CAB39Q9Y376 341 aaPredicted RBP12.21□□□□□ -0.45
SQSTM1-205ENST00000464493 LOC107986453A0A1B0GWG9 222 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 A6NIN4 97 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 TMEM210A6NLX4 147 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 E9PI62 339 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF205O95201 554 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 NRASP01111 189 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF12P17014 697 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 THBS2P35442 1172 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 MDH2P40926 338 aaKnown RBP12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 CDH15P55291 814 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF154Q13106 437 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 ZMYND11Q15326 602 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 FAM76BQ5HYJ3 339 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 CLVS2Q5SYC1 327 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 TMEM42Q69YG0 159 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF826PQ6ZT77 177 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 KCTD8Q6ZWB6 473 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 AHSA2Q719I0 299 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 WDR86Q86TI4 376 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 STX19Q8N4C7 294 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 KLHL36Q8N4N3 616 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 OR5A2Q8NGI9 324 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 HPSE2Q8WWQ2 592 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 MSI2Q96DH6 328 aaKnown RBP12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 C1orf159Q96HA4 380 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 GAL3ST1Q99999 423 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF665Q9H7R5 613 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 PLEKHA1Q9HB21 404 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 CLEC2DQ9UHP7 191 aa12.2□□□□□ -0.46
SQSTM1-205ENST00000464493 PPIAL4EA0A075B759 164 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 hCG_1807616A0A1W2PRN6 198 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 OR4C45A6NMZ5 311 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 PPIAL4DF5H284 164 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 RRP9O43818 475 aaKnown RBP12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 FSTL3O95633 263 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 PPIAL4FP0DN26 164 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 TGM4P49221 684 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 GPM6AP51674 278 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 GNG3P63215 75 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 TMEM155Q4W5P6 130 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 DMRTC1Q5HYR2 192 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 FAM201AQ5SY85 155 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 OR2G6Q5TZ20 316 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 PLCXD3Q63HM9 321 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 MUC20Q8N307 709 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 ZNF676Q8N7Q3 588 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 LINC01356Q8N9X3 169 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 RAB39BQ96DA2 213 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 FGF23Q9GZV9 251 aaPredicted RBP12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 TLNRD1Q9H1K6 362 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 TMEM165Q9HC07 324 aa12.19□□□□□ -0.46
SQSTM1-205ENST00000464493 FKBP14Q9NWM8 211 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms