RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 hCG_38984A0A1B0GV85 526 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 ANKRD30BLA7E2S9 258 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 FAM157AC9JC47 383 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 LMX1BO60663 402 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 ZNF205O95201 554 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 CYB5R3P00387 301 aaPredicted RBP14.35□□□□□ -0.11
VPS52-215ENST00000464425 HTR1AP08908 422 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 DDOSTP39656 456 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 PMELP40967 661 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 TGM4P49221 684 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 CDH15P55291 814 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 IRF3Q14653 427 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 OR2G6Q5TZ20 316 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 PRAMEF6Q5VXH4 476 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 OR2G2Q8NGZ5 317 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 SGCDQ92629 289 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 PPP1R14AQ96A00 147 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 POM121Q96HA1 1249 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 C1orf159Q96HA4 380 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 LYZL4Q96KX0 146 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 GAL3ST1Q99999 423 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 ZNF665Q9H7R5 613 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 UFSP2Q9NUQ7 469 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 FRRS1LQ9P0K9 344 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 KCNS2Q9ULS6 477 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 LRCH1Q9Y2L9 728 aa14.35□□□□□ -0.11
VPS52-215ENST00000464425 ABCA2Q9BZC7 2435 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.34□□□□□ -0.112e-6■■■■■ 29.4
VPS52-215ENST00000464425 TMEM178BH3BS89 294 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 GMDSO60547 372 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 CRLF1O75462 422 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 RPSAP08865 295 aaKnown RBP14.34□□□□□ -0.11
VPS52-215ENST00000464425 ATP6V1B1P15313 513 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 EEF1B2P24534 225 aaKnown RBP14.34□□□□□ -0.11
VPS52-215ENST00000464425 PSMB10P40306 273 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 CD200P41217 278 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 WNT4P56705 351 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 MPPED2Q15777 294 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 PRSS35Q8N3Z0 413 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 PLPP7Q8NBV4 271 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 GATAD2BQ8WXI9 593 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 MND1Q9BWT6 205 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 PPP1R3EQ9H7J1 279 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 GTF2A1LQ9UNN4 478 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 NOP16Q9Y3C1 178 aaKnown RBP14.34□□□□□ -0.11
VPS52-215ENST00000464425 RHBDD3Q9Y3P4 386 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 NAV3Q8IVL0 2385 aa14.34□□□□□ -0.11
VPS52-215ENST00000464425 B4DSR2 109 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 E9PI62 339 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 MYL12BO14950 172 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 IGHV2-70P01814 119 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 ISG15P05161 165 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 GRPP07492 148 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 NANOS3P60323 173 aaKnown RBP14.33□□□□□ -0.12
VPS52-215ENST00000464425 BTG1P62324 171 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 ALKBH1Q13686 389 aaKnown RBP14.33□□□□□ -0.12
VPS52-215ENST00000464425 ZMYND11Q15326 602 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 OR8B8Q15620 311 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 WDR38Q5JTN6 314 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 RPL22L1Q6P5R6 122 aaKnown RBP14.33□□□□□ -0.12
VPS52-215ENST00000464425 Q6ZSR3 168 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 KRT74Q7RTS7 529 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 COMMD2Q86X83 199 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 CELF2-AS1Q8N7Q2 184 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 CCDC54Q8NEL0 328 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 OR8S1Q8NH09 359 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 OR51E1Q8TCB6 317 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 SLC22A13Q9Y226 551 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 TANC2Q9HCD6 1990 aa14.33□□□□□ -0.12
VPS52-215ENST00000464425 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.32□□□□□ -0.12
VPS52-215ENST00000464425 LRRC30A6NM36 301 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 OR4C45A6NMZ5 311 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 IFNL4K9M1U5 179 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 OGG1O15527 345 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 MTRF1O75570 445 aaKnown RBP14.32□□□□□ -0.12
VPS52-215ENST00000464425 IGHV2-5P01817 119 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 UBCP0CG48 685 aaKnown RBP14.32□□□□□ -0.12
VPS52-215ENST00000464425 IRF2P14316 349 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 CCL1P22362 96 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 ACKR3P25106 362 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 KIR3DL2P43630 455 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 GATA4P43694 442 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 BDH1Q02338 343 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 ACSM1Q08AH1 577 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 KCTD21Q4G0X4 260 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 FAM201AQ5SY85 155 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 LRRC28Q86X40 367 aaPredicted RBP14.32□□□□□ -0.12
VPS52-215ENST00000464425 KLBQ86Z14 1044 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 CSNK2A3Q8NEV1 391 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 OR11L1Q8NGX0 322 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 RPS4Y2Q8TD47 263 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 RAB39BQ96DA2 213 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 PAPOLGQ9BWT3 736 aaKnown RBP14.32□□□□□ -0.12
VPS52-215ENST00000464425 CCDC90BQ9GZT6 254 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 TRIM36Q9NQ86 728 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 GPR84Q9NQS5 396 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 PCDHB10Q9UN67 800 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 LSM2Q9Y333 95 aaKnown RBP14.32□□□□□ -0.12
VPS52-215ENST00000464425 JMJD1CQ15652 2540 aa14.32□□□□□ -0.12
VPS52-215ENST00000464425 TRBV2A0A0J9YWF9 115 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms