RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 MYO7BQ6PIF6 2116 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 METTL21EPA6NDL7 271 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 TMEM8BA6NDV4 472 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 OR6C65A6NJZ3 312 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 ERCC1P07992 297 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-205ENST00000464187 HIST1H3AP68431 136 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 MRPS34P82930 218 aaKnown RBP12.66□□□□□ -0.38
COL5A1-205ENST00000464187 GALK2Q01415 458 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 GFOD2Q3B7J2 385 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 ZNF260Q3ZCT1 412 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 CCDC92Q53HC0 331 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-205ENST00000464187 HIST2H3PS2Q5TEC6 136 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 HIST2H3AQ71DI3 136 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 DOK3Q7L591 496 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 GCNT2Q8N0V5 402 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 LRRC18Q8N456 261 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 FAM46BQ96A09 425 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 CMBLQ96DG6 245 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 C12orf49Q9H741 205 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 GLRX2Q9NS18 164 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 PIPOXQ9P0Z9 390 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 SLC23A1Q9UHI7 598 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 SVILO95425 2214 aa12.66□□□□□ -0.38
COL5A1-205ENST00000464187 M0QYG6 137 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-205ENST00000464187 RAB3DO95716 219 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 IGLV3-1P01715 115 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 RLN1P04808 185 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 TPOP07202 933 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 ZNF93P35789 620 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-205ENST00000464187 AWAT2Q6E213 333 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 RAB12Q6IQ22 244 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 PGAP1Q75T13 922 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 ZNF100Q8IYN0 542 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 GJC3Q8NFK1 279 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 OR2T35Q8NGX2 323 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 OR14K1Q8NGZ2 314 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 WNT2BQ93097 391 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 SNRNP40Q96DI7 357 aaKnown RBP12.65□□□□□ -0.38
COL5A1-205ENST00000464187 PGAM5Q96HS1 289 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 LYZL4Q96KX0 146 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 FOXB1Q99853 325 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 CHIAQ9BZP6 476 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 PRORYQ9H606 182 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 UPB1Q9UBR1 384 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 FBLN5Q9UBX5 448 aa12.65□□□□□ -0.38
COL5A1-205ENST00000464187 TMEM14DPA8MWL7 114 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 TSC22D2O75157 780 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 CD74P04233 296 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 B4GALT1P15291 398 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 TDGF1P3P51864 188 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 FAM27BQ5VT28 67 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 NSUN5P2Q63ZY6 315 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF767PQ75MW2 155 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 NAA40Q86UY6 237 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 FJX1Q86VR8 437 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 ANGPTL5Q86XS5 388 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 CDH26Q8IXH8 852 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 C9orf106Q8NAJ2 232 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 KDF1Q8NAX2 398 aaPredicted RBP12.65□□□□□ -0.39
COL5A1-205ENST00000464187 SNAPC3Q92966 411 aa12.65□□□□□ -0.39
COL5A1-205ENST00000464187 TINAGL1Q9GZM7 467 aaPredicted RBP12.65□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF107Q9UII5 783 aaPredicted RBP12.65□□□□□ -0.39
COL5A1-205ENST00000464187 RTTNQ86VV8 2226 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF587BE7ETH6 402 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 RPL36A-HNRNPH2H7BZ11 118 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 CYB5AP00167 134 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 MELTFP08582 738 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 GIPP09681 153 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF735P0CB33 412 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 HTR2BP41595 481 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 OR3A4PP47883 348 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 RSPO1Q2MKA7 263 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-205ENST00000464187 LGALSLQ3ZCW2 172 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-205ENST00000464187 FAM214BQ7L5A3 538 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 SSC4DQ8WTU2 575 aa12.64□□□□□ -0.39
COL5A1-205ENST00000464187 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-205ENST00000464187 MRPS28Q9Y2Q9 187 aaKnown RBP12.64□□□□□ -0.39
COL5A1-205ENST00000464187 TLN1Q9Y490 2541 aaKnown RBP12.64□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF736B4DX44 427 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-205ENST00000464187 F5H5K5 113 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 WDR1O75083 606 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 TOXO94900 526 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 AMY2AP04746 511 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 OTX1P32242 354 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-205ENST00000464187 GUSBP1Q15486 140 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 PRR30Q53SZ7 412 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-205ENST00000464187 C6orf183Q5T699 404 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 C9orf135Q5VTT2 229 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 GLIPR1L1Q6UWM5 242 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 TRAPPC6BQ86SZ2 158 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 RTN4RL2Q86UN3 420 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 CD163Q86VB7 1156 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF584Q8IVC4 421 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 CHST4Q8NCG5 386 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 FBXO17Q96EF6 278 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 SLX1AQ9BQ83 275 aa12.63□□□□□ -0.39
COL5A1-205ENST00000464187 CHST6Q9GZX3 395 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms