RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 PLPP2O43688 288 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 FGF17O60258 216 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GPRIN2O60269 458 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 RBMXL2O75526 392 aaKnown RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ARL6IP5O75915 188 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 MPZL1O95297 269 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 EFEMP2O95967 443 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GBAP04062 536 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OR2T7P0C7T2 308 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF28P17035 718 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CR2P20023 1033 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 EDNRAP25101 427 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 LMO1P25800 156 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 APOBEC3AP31941 199 aaPredicted RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CCKARP32238 428 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PPP1CCP36873 323 aaKnown RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 LGALS7P47929 136 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CLDN18P56856 261 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ERVS71-1P61550 626 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GNB2P62879 340 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 HIST1H3AP68431 136 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 HTD2P86397 168 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GNMTQ14749 295 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 SYPL1Q16563 259 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM177Q53S58 311 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ASPHD2Q6ICH7 369 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM182Q6ZP80 229 aaPredicted RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 FAM214BQ7L5A3 538 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ABHD12BQ7Z5M8 362 aaPredicted RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 MRPL52Q86TS9 123 aaKnown RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF440Q8IYI8 595 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 EID2Q8N6I1 236 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 SLC26A10Q8NG04 563 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OR56A1Q8NGH5 318 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OR52L2PQ8NGH6 319 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 FAM213BQ8TBF2 198 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CPT1CQ8TCG5 803 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF689Q96CS4 500 aaPredicted RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 LINC00615Q96LM1 132 aaPredicted RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PDCD1LG2Q9BQ51 273 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 NIPSNAP3BQ9BS92 247 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PCGF1Q9BSM1 259 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 SLC17A9Q9BYT1 436 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 DPH1Q9BZG8 443 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 WNT10AQ9GZT5 417 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CXorf36Q9H7Y0 433 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GPR35Q9HC97 309 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 NOX4Q9NPH5 578 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 NUDT4Q9NZJ9 180 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF319Q9P2F9 582 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 VAX2Q9UIW0 290 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CORO2BQ9UQ03 480 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 LAMP3Q9UQV4 416 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 FUT9Q9Y231 359 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ST3GAL6Q9Y274 331 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 LAMTOR2Q9Y2Q5 125 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 RNF115Q9Y4L5 304 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PLXNA4Q9HCM2 1894 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CDHR4A6H8M9 788 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ARRDC5A6NEK1 342 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 IGLON5A6NGN9 336 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 IFITM5A6NNB3 132 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 H0YIZ8 118 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CORTO00230 105 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GABRDO14764 452 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 KLK8O60259 260 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OR7C2O60412 319 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 TNFSF13O75888 250 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PDGFBP01127 241 aaPredicted RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 LINC00271P0C7V0 271 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 TACR2P21452 398 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 DRD1P21728 446 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 FBLP22087 321 aaKnown RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 FCARP24071 287 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 S100GP29377 79 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GLIPR1P48060 266 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 FXYD6P3P58550 94 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PPP2CBP62714 309 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PPP2CAP67775 309 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CAPSQ13938 189 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 PRSS8Q16651 343 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OLIG3Q7RTU3 272 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ZBTB2Q8N680 514 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OR2T33Q8NG76 320 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 OR9A4Q8NGU2 314 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 SKA2Q8WVK7 121 aaPredicted RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 TMEM40Q8WWA1 233 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 TVP23CQ96ET8 276 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CDKN2AIPNLQ96HQ2 116 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ZNF479Q96JC4 524 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 SLC41A2Q96JW4 573 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 SLC46A1Q96NT5 459 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CMKLR1Q99788 373 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 RNF126Q9BV68 326 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 GTSF1LQ9H1H1 148 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 CHST8Q9H2A9 424 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 KCNK15Q9H427 330 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 ZMAT3Q9HA38 289 aaKnown RBP3.2□□□□□ -1.9
COL8A1-205ENST00000463753 POPDC3Q9HBV1 291 aa3.2□□□□□ -1.9
COL8A1-205ENST00000463753 BPIFA1Q9NP55 256 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms