RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 RER1O15258 196 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 IDH3BO43837 385 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 MRPL33O75394 65 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RAD51DO75771 328 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 GLCEO94923 617 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 VAMP5O95183 116 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 PTHP01270 115 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 IGHG1P01857 330 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 HLA-HP01893 362 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 HMGN1P05114 100 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LCKP06239 509 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RPSAP08865 295 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SBK2P0C263 348 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LIMS3P0CW19 117 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LIMS4P0CW20 117 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ARSBP15848 533 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC25A16P16260 332 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF3P17036 446 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 COX5AP20674 150 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LAP3P28838 519 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 HTR1FP30939 366 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CDKN1AP38936 164 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 HSPA13P48723 471 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ETV1P50549 477 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SELENOVP59797 346 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CDC42P60953 191 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC35A2P78381 396 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 IL18R1Q13478 541 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 IRF3Q14653 427 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RSPO1Q2MKA7 263 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC25A30Q5SVS4 291 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 NCMAPQ5T1S8 102 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 C10orf128Q5T292 105 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR2G6Q5TZ20 316 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 DCAF12L2Q5VW00 463 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 CHMP1BQ7LBR1 199 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 DPY19L4Q7Z388 723 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RNF144BQ7Z419 303 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ERI1Q8IV48 349 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF584Q8IVC4 421 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SKA3Q8IX90 412 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC43A2Q8N370 569 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LRRC18Q8N456 261 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 WDR31Q8NA23 367 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF485Q8NCK3 441 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 PROKR2Q8NFJ6 384 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR6K6Q8NGW6 343 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR6K3Q8NGY3 331 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 HSD17B8Q92506 261 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 APH1AQ96BI3 265 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF75AQ96N20 296 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 SLC38A2Q96QD8 506 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 OR5M11Q96RB7 305 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF416Q9BWM5 594 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 RACGAP1Q9H0H5 632 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 VCXQ9H320 206 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 VCX3BQ9H321 246 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 DUSP21Q9H596 190 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 MARCH7Q9H992 704 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ISG20L2Q9H9L3 353 aaKnown RBP3.07□□□□□ -1.92
SCFD1-204ENST00000463622 TIGARQ9NQ88 270 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 TMEM38BQ9NVV0 291 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 NPAP1Q9NZP6 1156 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 MALT1Q9UDY8 824 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 KLHL21Q9UJP4 597 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 FBXL3Q9UKT7 428 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 BAIAP2Q9UQB8 552 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 LRCH1Q9Y2L9 728 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 FKBP7Q9Y680 259 aa3.07□□□□□ -1.92
SCFD1-204ENST00000463622 ARHGAP21Q5T5U3 1957 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 TRBV5-7A0A0A0MS05 114 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 A0A1W2PQL4 384 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FAM90A18PA6NE21 464 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FAM90A16PA6NEW6 464 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 A6NIZ1 184 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF726A6NNF4 738 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FAM90A9PA6NNJ1 464 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 C12orf71A8MTZ7 269 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FAM90A5PA8MXJ8 464 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 PTGES3LE9PB15 166 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 XKRYO14609 159 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 SPRY3O43610 288 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 TCF21O43680 179 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 AHCYL1O43865 530 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 SSX4O60224 188 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 KHDRBS3O75525 346 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FADS2O95864 444 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 RENP00797 406 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 IFNGP01579 166 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 LYNP07948 512 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 MMP7P09237 267 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 SPARCP09486 303 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FAM90A15PP0C7V4 464 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FAM90A14PP0C7W9 464 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FCGR2AP12318 317 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 CCL2P13500 99 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF32P17041 273 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 PSMB1P20618 241 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 PCMT1P22061 227 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms