RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 RAB1CQ92928 201 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 IL20Q9NYY1 176 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 SSTP61278 116 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 CDK5Q00535 292 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 PDCD1Q15116 288 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 ZG16BQ96DA0 208 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 OR5G3P0C626 314 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 SFTPA2Q8IWL1 248 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 SLC35B4Q969S0 331 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 RPEQ96AT9 228 aa11.44□□□□□ -0.58
NUP58-206ENST00000463407 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
NUP58-206ENST00000463407 ZNF638Q14966 1978 aaKnown RBP11.44□□□□□ -0.58
NUP58-206ENST00000463407 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
NUP58-206ENST00000463407 PPT1P50897 306 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 STUMQ69YW2 141 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 BIN3Q9NQY0 253 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 TRIP11Q15643 1979 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 SP1P08047 785 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 S100A11P31949 105 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 TIAL1Q01085 375 aaKnown RBP eCLIP11.43□□□□□ -0.58
NUP58-206ENST00000463407 SLC25A35Q3KQZ1 300 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 SIRT3Q9NTG7 399 aaPredicted RBP11.43□□□□□ -0.58
NUP58-206ENST00000463407 RGPD3A6NKT7 1758 aaPredicted RBP11.43□□□□□ -0.58
NUP58-206ENST00000463407 COX7A1P24310 79 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 TMEM268Q5VZI3 342 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 PTPMT1Q8WUK0 201 aaPredicted RBP11.43□□□□□ -0.58
NUP58-206ENST00000463407 SIRT5Q9NXA8 310 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 SBF2Q86WG5 1849 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 SSSCA1O60232 199 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 CRYZL1O95825 349 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 EPPINO95925 133 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 IAPPP10997 89 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 EXTL1Q92935 676 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 CXXC4Q9H2H0 198 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 TAF9BQ9HBM6 251 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 TREM2Q9NZC2 230 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 CSAG2Q9Y5P2 127 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 ST8SIA5O15466 376 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 OR5H8P0DN80 308 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 ASAH1Q13510 395 aa11.43□□□□□ -0.58
NUP58-206ENST00000463407 TRAV1-2A0A0B4J238 106 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 A0A1B0GTH9 108 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 SH2D7A6NKC9 451 aaPredicted RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 COL11A1P12107 1806 aaPredicted RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 NUFIP2Q7Z417 695 aaKnown RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 TMEM104Q8NE00 496 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 NMES1Q9C002 83 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 A0A1W2PPV9 198 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 HRKO00198 91 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 DLL1O00548 723 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 ST8SIA3O43173 380 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 SEMG1P04279 462 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 CYC1P08574 325 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 PEBP1P30086 187 aaKnown RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 MLF1P58340 268 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 PXT1Q8NFP0 134 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 OR13C8Q8NGS7 320 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 PCNPQ8WW12 178 aaKnown RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 CHST6Q9GZX3 395 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 PSMB3P49720 205 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 BAMBIQ13145 260 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 RTP5Q14D33 572 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 GAB4Q2WGN9 574 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 C19orf48Q6RUI8 117 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 SPSB1Q96BD6 273 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 C12orf10Q9HB07 376 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 A0A1W2PQD3 144 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 HYAL3O43820 417 aaPredicted RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 HPNP05981 417 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 GP1BAP07359 652 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 UBE2G2P60604 165 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 AARDQ4LEZ3 155 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 OR2G3Q8NGZ4 309 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 AUNIPQ9H7T9 357 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 MEX3AA1L020 520 aaKnown RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 NGFP01138 241 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 CD3DP04234 171 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 ADRA2CP18825 462 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 VMA21Q3ZAQ7 101 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 SVBPQ8N300 66 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 OR6S1Q8NH40 331 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 ASB10Q8WXI3 467 aa11.42□□□□□ -0.58
NUP58-206ENST00000463407 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
NUP58-206ENST00000463407 NKX2-8O15522 239 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 DHRS3O75911 302 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 EPXP11678 715 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 PI3P19957 117 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 DTYMKP23919 212 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 MCCD1P59942 119 aaPredicted RBP11.41□□□□□ -0.58
NUP58-206ENST00000463407 GPNMBQ14956 572 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 SLC51BQ86UW2 128 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 ZNF441Q8N8Z8 693 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 ASB5Q8WWX0 329 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 CLDN23Q96B33 292 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 A0A0A6YYJ9 748 aa11.41□□□□□ -0.58
NUP58-206ENST00000463407 SSX4O60224 188 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms