RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 hCG_38984A0A1B0GV85 526 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 RAB3DO95716 219 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 IL18BPO95998 194 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 MELTFP08582 738 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 ZNF735P0CB33 412 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 FAUP35544 74 aaKnown RBP11.12□□□□□ -0.63
VAPB-203ENST00000463370 GSK3AP49840 483 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 GZMKP49863 264 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 TAS2R19P59542 299 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 SSBP1Q04837 148 aaKnown RBP11.12□□□□□ -0.63
VAPB-203ENST00000463370 RIPPLY1Q0D2K3 151 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 HIKESHIQ53FT3 197 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 GLDNQ6ZMI3 551 aaPredicted RBP11.12□□□□□ -0.63
VAPB-203ENST00000463370 OR2W3Q7Z3T1 314 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 TMEM229BQ8NBD8 167 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 COL25A1Q9BXS0 654 aaPredicted RBP11.12□□□□□ -0.63
VAPB-203ENST00000463370 PAIP2BQ9ULR5 123 aaKnown RBP11.12□□□□□ -0.63
VAPB-203ENST00000463370 KCNMB2Q9Y691 235 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 ATMQ13315 3056 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 A0A1B0GUH1 482 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 CYB5AP00167 134 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 PLATP00750 562 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 C1QBP02746 253 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 CSN2P05814 226 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 SULT1A3P0DMM9 295 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 SULT1A4P0DMN0 295 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 CD79AP11912 226 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 SERPINA2P20848 420 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 RBMS2Q15434 407 aaKnown RBP11.12□□□□□ -0.63
VAPB-203ENST00000463370 NKPD1Q17RQ9 610 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 ZNF584Q8IVC4 421 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 ARHGAP5-AS1Q96IT6 56 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 C1QTNF5Q9BXJ0 243 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
VAPB-203ENST00000463370 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 C5orf49A4QMS7 147 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 ZNF736B4DX44 427 aaPredicted RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 SPRY1O43609 319 aaPredicted RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 ANGPTL7O43827 346 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 ATP6V1G1O75348 118 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 ALX3O95076 343 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 RTP5Q14D33 572 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 SEZ6L2Q6UXD5 910 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 FGD2Q7Z6J4 655 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 GCNT2Q8N0V5 402 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 PNLDC1Q8NA58 520 aaKnown RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 NAXEQ8NCW5 288 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 DEDD2Q8WXF8 326 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 C10orf35Q96D05 121 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 RAB3CQ96E17 227 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 SLC6A7Q99884 636 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 CUL9Q8IWT3 2517 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 IGHG3P01860 377 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 CD74P04233 296 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 AMY2AP04746 511 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 RLN1P04808 185 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 HIST1H1DP16402 221 aaKnown RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 MGMTP16455 207 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 ALDH3B1P43353 468 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 MECP2P51608 486 aaKnown RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 MTCP1P56278 107 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 RPS27AP62979 156 aaKnown RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 IDO2Q6ZQW0 420 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 COLCA1Q6ZS62 124 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 SLC36A1Q7Z2H8 476 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 CD163Q86VB7 1156 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 ELL3Q9HB65 397 aaPredicted RBP11.11□□□□□ -0.63
VAPB-203ENST00000463370 CA10Q9NS85 328 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 ZNF581Q9P0T4 197 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 ZNF69Q9UC07 566 aa11.11□□□□□ -0.63
VAPB-203ENST00000463370 SPTBN2O15020 2390 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 OR6C65A6NJZ3 312 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 DHRS7CA6NNS2 312 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 CHRM2P08172 466 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 UBE2MP61081 183 aaKnown RBP11.1□□□□□ -0.63
VAPB-203ENST00000463370 RAB1AP62820 205 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 METTL11BQ5VVY1 283 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 TMEM42Q69YG0 159 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 LAMTOR1Q6IAA8 161 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 LIX1LQ8IVB5 337 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 OR11H4Q8NGC9 324 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 OR51T1Q8NGJ9 327 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 OR5M9Q8NGP3 310 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 SNAPC3Q92966 411 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
VAPB-203ENST00000463370 PRDM14Q9GZV8 571 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 MEIKINA0A087WXM9 373 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 TRAV17A0A0B4J275 112 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 ZNF891A8MT65 544 aaPredicted RBP11.1□□□□□ -0.63
VAPB-203ENST00000463370 FOXI3A8MTJ6 420 aaPredicted RBP11.1□□□□□ -0.63
VAPB-203ENST00000463370 AKR7A2O43488 359 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 PRAF2O60831 178 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 NGFP01138 241 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 HLXQ14774 488 aaPredicted RBP11.1□□□□□ -0.63
VAPB-203ENST00000463370 CDK10Q15131 360 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 OR8B8Q15620 311 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 FAM89BQ8N5H3 189 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 OR13C8Q8NGS7 320 aa11.1□□□□□ -0.63
VAPB-203ENST00000463370 SPSB4Q96A44 273 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms