RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CIB1Q99828 191 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 SULT4A1Q9BR01 284 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 UPF3BQ9BZI7 483 aaKnown RBP2.67□□□□□ -1.98
USH2A-203ENST00000463147 PARP12Q9H0J9 701 aaKnown RBP2.67□□□□□ -1.98
USH2A-203ENST00000463147 PORCNQ9H237 461 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 PDFQ9HBH1 243 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ACOT13Q9NPJ3 140 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 FAM49BQ9NUQ9 324 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 ANAPC11Q9NYG5 84 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 NYAP2Q9P242 653 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 STX18Q9P2W9 335 aaKnown RBP2.67□□□□□ -1.98
USH2A-203ENST00000463147 PSG11Q9UQ72 335 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 SIGLEC7Q9Y286 467 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 TNS2Q63HR2 1409 aa2.67□□□□□ -1.98
USH2A-203ENST00000463147 FAM240AA0A1B0GVK7 77 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 SLC5A10A0PJK1 596 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 KRBOX1C9JBD0 128 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 J3QT63 122 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 GATCO43716 136 aaKnown RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 SHOX2O60902 331 aaPredicted RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 REM1O75628 298 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 RCBTB2O95199 551 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 LDOC1O95751 146 aaPredicted RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 SLC25A27O95847 323 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 FADS2O95864 444 aaKnown RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 OR5AL1P0C617 328 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 PGAM1P18669 254 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 DRD3P35462 400 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 ARR3P36575 388 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 UBE2AP49459 152 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 CRADDP78560 199 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 INCA1Q0VD86 236 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 SHHQ15465 462 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 C6orf99Q4VX62 202 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 RSBN1Q5VWQ0 802 aaPredicted RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 KHDRBS2Q5VWX1 349 aaKnown RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 AHSA2Q719I0 299 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 SPATA24Q86W54 205 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 BOD1L2Q8IYS8 172 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 FAM9CQ8IZT9 166 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 GAPTQ8N292 157 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 ZNF645Q8N7E2 425 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 ARIH2OSQ8N7S6 290 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 LINC00469Q8N7U9 141 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 RXFP4Q8TDU9 374 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 C15orf40Q8WUR7 153 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 GHSRQ92847 366 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 PTX4Q96A99 478 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 ELSPBP1Q96BH3 223 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 KCNS1Q96KK3 526 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 TEAD3Q99594 435 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 COPS4Q9BT78 406 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 OR52D1Q9H346 318 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 RPP21Q9H633 154 aaKnown RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 SLC38A10Q9HBR0 1119 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 TMBIM4Q9HC24 238 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 IFT46Q9NQC8 304 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 RPS6KB2Q9UBS0 482 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 NDRG2Q9UN36 371 aaKnown RBP2.66□□□□□ -1.98
USH2A-203ENST00000463147 TFR2Q9UP52 801 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 PPIL1Q9Y3C6 166 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 URGCP-MRPS24S4R325 110 aa2.66□□□□□ -1.98
USH2A-203ENST00000463147 A0A096LNJ9 63 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 TRBV6-6A0A0A6YYG2 114 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 CCL15-CCL14A0A0B4J2E2 113 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 IGHV5-10-1A0A0J9YXX1 117 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 A0A0U1RQV1 116 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 C5orf63A6NC05 138 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 ZNF233A6NK53 670 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 NDUFC2-KCTD14E9PQ53 114 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 ANGPTL7O43827 346 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 CDC40O60508 579 aaKnown RBP eCLIP2.65□□□□□ -1.99
USH2A-203ENST00000463147 CDK14O94921 469 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 IGLV2-8P01709 118 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 SLC35G6P0C7Q6 338 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 SYT1P21579 422 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 PSMB6P28072 239 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 HTR1DP28221 377 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 RANBP1P43487 201 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 OR10A3P58181 314 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 IL5RAQ01344 420 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 SYCP1Q15431 976 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 CCL15Q16663 113 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 TCEAL5Q5H9L2 206 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 SLC7A5P1Q8MH63 180 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 LGI3Q8N145 548 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 C19orf18Q8NEA5 215 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 TCEAL3Q969E4 200 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 TM4SF18Q96CE8 201 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 BMFQ96LC9 184 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 ZFP3Q96NJ6 502 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 CYTH2Q99418 400 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 GGTLC1Q9BX51 225 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 ZNF331Q9NQX6 463 aaPredicted RBP2.65□□□□□ -1.99
USH2A-203ENST00000463147 NLE1Q9NVX2 485 aaPredicted RBP2.65□□□□□ -1.99
USH2A-203ENST00000463147 RHBDL2Q9NX52 303 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 CFL2Q9Y281 166 aa2.65□□□□□ -1.99
USH2A-203ENST00000463147 WRNQ14191 1432 aaPredicted RBP eCLIP2.65□□□□□ -1.99
USH2A-203ENST00000463147 VWA8A3KMH1 1905 aa2.64□□□□□ -1.99
USH2A-203ENST00000463147 KIR2DS1A0A191URI9 304 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms