RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PTGES3Q15185 160 aaKnown RBP15.67■□□□□ 0.1
VARS-220ENST00000461874 FAM76BQ5HYJ3 339 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 WDR38Q5JTN6 314 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 METTL11BQ5VVY1 283 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 KCTD18Q6PI47 426 aaPredicted RBP15.67■□□□□ 0.1
VARS-220ENST00000461874 OR10Z1Q8NGY1 313 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 OR5K1Q8NHB7 308 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 ST8SIA4Q92187 359 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 PIGCQ92535 297 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 ZDHHC16Q969W1 377 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 SEH1LQ96EE3 360 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 CCL13Q99616 98 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 PKP2Q99959 881 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 SIRPDQ9H106 197 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 PCDHGB1Q9Y5G3 927 aa15.67■□□□□ 0.1
VARS-220ENST00000461874 CENPVL3A0A0U1RRI6 287 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 A0A1B0GW55 424 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 HOXA3O43365 443 aaPredicted RBP15.66■□□□□ 0.1
VARS-220ENST00000461874 PRKYO43930 277 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4L2P0CJ85 424 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4L3P0CJ86 424 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4L4P0CJ87 422 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4L5P0CJ88 424 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4L6P0CJ89 424 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4L7P0CJ90 424 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 ARF6P62330 175 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 ESRRGP62508 458 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 LCN1P1Q5VSP4 162 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 RUSC1-AS1Q66K80 236 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 C16orf87Q6PH81 154 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4L9Q6RFH8 374 aaPredicted RBP15.66■□□□□ 0.1
VARS-220ENST00000461874 KRT74Q7RTS7 529 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 SLC36A1Q7Z2H8 476 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 FGFRL1Q8N441 504 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 HPSE2Q8WWQ2 592 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 RPL3LQ92901 407 aaKnown RBP15.66■□□□□ 0.1
VARS-220ENST00000461874 RNF170Q96K19 258 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 MROQ9BYG7 248 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 FGF23Q9GZV9 251 aaPredicted RBP15.66■□□□□ 0.1
VARS-220ENST00000461874 NOX4Q9NPH5 578 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 FAM206AQ9NX38 181 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 DUX4Q9UBX2 424 aa15.66■□□□□ 0.1
VARS-220ENST00000461874 RPUSD1Q9UJJ7 312 aaKnown RBP15.66■□□□□ 0.1
VARS-220ENST00000461874 A0A0U1RQV5 110 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 TMEM269A0A1B0GVZ9 245 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 PRR32B1ATL7 298 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 PSMD9O00233 223 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 MRPL3P09001 348 aaKnown RBP15.65■□□□□ 0.1
VARS-220ENST00000461874 AMY2BP19961 511 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 TGM4P49221 684 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 ROM1Q03395 351 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 PDCD1Q15116 288 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 ATPAF1Q5TC12 328 aaPredicted RBP15.65■□□□□ 0.1
VARS-220ENST00000461874 Q6YL49 198 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 ZDHHC23Q8IYP9 409 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 FAM216BQ8N7L0 139 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 SCCPDHQ8NBX0 429 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 ASB17Q8WXJ9 295 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 ITFG2Q969R8 447 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 CNTD2Q9H8S5 307 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 HAO2Q9NYQ3 351 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 TMEM14AQ9Y6G1 99 aa15.65■□□□□ 0.1
VARS-220ENST00000461874 ZNF816-ZNF321PA0A0X1KG74 233 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 MITFO75030 526 aaPredicted RBP15.64■□□□□ 0.09
VARS-220ENST00000461874 ZNF254O75437 659 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 DCTDP32321 178 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 MAP2K3P46734 347 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 GMFBP60983 142 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 IL13RA1P78552 427 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 EFNB1P98172 346 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 ATP6AP1Q15904 470 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 STUMQ69YW2 141 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 SHISA2Q6UWI4 295 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 KCTD8Q6ZWB6 473 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 ZNF679Q8IYX0 411 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 LY6G5BQ8NDX9 201 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 OR5T2Q8NGG2 359 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 FAM81AQ8TBF8 368 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 GATAD2BQ8WXI9 593 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 TAF15Q92804 592 aaKnown RBP eCLIP15.64■□□□□ 0.09
VARS-220ENST00000461874 RAB3IPQ96QF0 476 aaPredicted RBP15.64■□□□□ 0.09
VARS-220ENST00000461874 HIST1H2AAQ96QV6 131 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 OR8B4Q96RC9 309 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 PRRG3Q9BZD7 231 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 PBOV1Q9GZY1 135 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 WDR13Q9H1Z4 485 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 KRT84Q9NSB2 600 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 COPS3Q9UNS2 423 aa15.64■□□□□ 0.09
VARS-220ENST00000461874 IGHV1-69DA0A0B4J2H0 117 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 G3V2T6 193 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 GPR37O15354 613 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 NDUFB3O43676 98 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 IGHV1-69P01742 117 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 EPHA2P29317 976 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 CDONQ4KMG0 1287 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 SLX4IPQ5VYV7 408 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 MEPCEQ7L2J0 689 aaKnown RBP15.63■□□□□ 0.09
VARS-220ENST00000461874 BCDIN3DQ7Z5W3 292 aaKnown RBP15.63■□□□□ 0.09
VARS-220ENST00000461874 LHX4Q969G2 390 aa15.63■□□□□ 0.09
VARS-220ENST00000461874 FAM71F1Q96KD3 344 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms