RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GGNBP1Q5YKI7 109 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 ALKAL1Q6UXT8 129 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 UBE2FQ969M7 185 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM191AQ9H0A3 160 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 CLEC1BQ9P126 229 aa8.11□□□□□ -1.11
BRCA1-205ENST00000461221 MYO10Q9HD67 2058 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 SHPRHQ149N8 1683 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 IGLV3-10A0A075B6K4 115 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 IGHV3-64DA0A0J9YX35 117 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 FCN1O00602 326 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 SMIM18P0DKX4 95 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 GZMKP49863 264 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 TUSC5Q8IXB3 177 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 OR10D4PQ8NGN7 298 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 RNF167Q9H6Y7 350 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-205ENST00000461221 SLCO1C1Q9NYB5 712 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 SLC22A13Q9Y226 551 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 CCL26Q9Y258 94 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 GOLGA4Q13439 2230 aaKnown RBP8.1□□□□□ -1.11
BRCA1-205ENST00000461221 A0A1W2PNV4 684 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 TTRP02766 147 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 CSF2RBP32927 897 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 ATP6V1FQ16864 119 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 OR2G2Q8NGZ5 317 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM37Q8WXS4 190 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 ZDHHC5Q9C0B5 715 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 GAL3ST2Q9H3Q3 398 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 AUNIPQ9H7T9 357 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 ICAM5Q9UMF0 924 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 LOXL2Q9Y4K0 774 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 MYH7BA7E2Y1 1941 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 MYH3P11055 1940 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 DEDDO75618 318 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 B3GALT4O96024 378 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 B4GALT1P15291 398 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM174Q8WUU8 243 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 WSB1Q9Y6I7 421 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 CACNA1FO60840 1977 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 FAM208AQ9UK61 1670 aaKnown RBP8.1□□□□□ -1.11
BRCA1-205ENST00000461221 SLC17A2O00624 439 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 CST2P09228 141 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 PTHLHP12272 177 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 BCL3P20749 454 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 DCTDP32321 178 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 DSCR4P56555 118 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-205ENST00000461221 RPL30P62888 115 aaKnown RBP8.1□□□□□ -1.11
BRCA1-205ENST00000461221 GNG3P63215 75 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 LSM11P83369 360 aaKnown RBP eCLIP8.1□□□□□ -1.11
BRCA1-205ENST00000461221 KCNAB1Q14722 419 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 DEFB109BQ30KR1 87 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 CLLU1Q5K131 121 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 GLDNQ6ZMI3 551 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-205ENST00000461221 PAQR9Q6ZVX9 377 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 SFTPA2Q8IWL1 248 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 SFTPA1Q8IWL2 248 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 MED29Q9NX70 200 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 NAGKQ9UJ70 344 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 MMP17Q9ULZ9 603 aa8.1□□□□□ -1.11
BRCA1-205ENST00000461221 CST7O76096 145 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 PAQR6Q6TCH4 344 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 CRYGNQ8WXF5 182 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 MAP6Q96JE9 813 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 FGF22Q9HCT0 170 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 MBNL1Q9NR56 388 aaKnown RBP8.09□□□□□ -1.11
BRCA1-205ENST00000461221 B9D1Q9UPM9 204 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 MAP1LC3B2A6NCE7 125 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 GFYI3L273 518 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 CDK2AP1O14519 115 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 SPRY1O43609 319 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-205ENST00000461221 TMPRSS11DO60235 418 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 SEMA7AO75326 666 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 EPXP11678 715 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 PPP2CAP67775 309 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 SMAGPQ0VAQ4 97 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 MICBQ29980 383 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 OR1F12Q8NHA8 337 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 YIPF6Q96EC8 236 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 MFRPQ9BY79 579 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 MAP1LC3BQ9GZQ8 125 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 SLC7A10Q9NS82 523 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 TAAR3PQ9P1P4 343 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 TBC1D29Q9UFV1 150 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 U3KQ87 197 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 DUXBA0A1W2PPF3 345 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 H3BP45 60 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 KRASP01116 189 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 CAPZBP47756 277 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 CDC34P49427 236 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-205ENST00000461221 PRRX1P54821 245 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 PCBP3P57721 371 aaKnown RBP8.09□□□□□ -1.11
BRCA1-205ENST00000461221 TMEM267Q0VDI3 215 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-205ENST00000461221 Q3ZCU0 254 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 FNDC7Q5VTL7 733 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 TEX261Q6UWH6 196 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 OR6S1Q8NH40 331 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 C16orf52Q8NHV5 167 aa8.09□□□□□ -1.11
BRCA1-205ENST00000461221 TEX37Q96LM6 180 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms