RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CTSLP07711 333 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 RHOXF2BP0C7M4 288 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 OR8G3PP0DMU2 310 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 RAB3AP20336 220 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 U2AF2P26368 475 aaKnown RBP eCLIP1.94□□□□□ -2.1
RFC4-211ENST00000460408 SSTR5P35346 364 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 PMELP40967 661 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 PPP1CBP62140 327 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 SEMG2Q02383 582 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 PSMD5Q16401 504 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 CHRFAM7AQ494W8 412 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 ORMDL2Q53FV1 153 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 TCEAL5Q5H9L2 206 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 NANOGP8Q6NSW7 305 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 TMEM53Q6P2H8 277 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 PRMT9Q6P2P2 845 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 SPESP1Q6UW49 350 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 EIF3MQ7L2H7 374 aaKnown RBP1.94□□□□□ -2.1
RFC4-211ENST00000460408 SSX9Q7RTT3 188 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 PIFOQ8TCI5 191 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 ESR2Q92731 530 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 ZBED3Q96IU2 234 aaPredicted RBP1.94□□□□□ -2.1
RFC4-211ENST00000460408 CAMK2N2Q96S95 79 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 UCK2Q9BZX2 261 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 TMEM38AQ9H6F2 299 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 MRPS30Q9NP92 439 aaKnown RBP1.94□□□□□ -2.1
RFC4-211ENST00000460408 CTSFQ9UBX1 484 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 ZNF282Q9UDV7 671 aaPredicted RBP1.94□□□□□ -2.1
RFC4-211ENST00000460408 MTFP1Q9UDX5 166 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 TRMT112Q9UI30 125 aaKnown RBP1.94□□□□□ -2.1
RFC4-211ENST00000460408 TSSC4Q9Y5U2 329 aaPredicted RBP1.94□□□□□ -2.1
RFC4-211ENST00000460408 FRYLO94915 3013 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 DENND4AQ7Z401 1863 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 MED23Q9ULK4 1368 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 ECM29Q5VYK3 1845 aa1.94□□□□□ -2.1
RFC4-211ENST00000460408 ELP1O95163 1332 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ACACAQ13085 2346 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 A6NDN8 102 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 L7N2F9 121 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 BPY2O14599 106 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 BET1O15155 118 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 RAD51BO15315 384 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 OXTP01178 125 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 TPM2P07951 284 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ADRA2AP08913 450 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ERGP11308 486 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 SFTPCP11686 197 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 MUC1P15941 1255 aaPredicted RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 EIF2S2P20042 333 aaKnown RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 SYNJ2BPP57105 145 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 UBE2NP61088 152 aaKnown RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 FAM78AQ5JUQ0 283 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ZNF684Q5T5D7 378 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 C1orf185Q5T7R7 199 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 MBOAT2Q6ZWT7 520 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 CDKL3Q8IVW4 592 aaPredicted RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 METTL13Q8N6R0 699 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 TTC29Q8NA56 475 aaPredicted RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 CHST4Q8NCG5 386 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 OR56A4Q8NGH8 313 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 OR52K2Q8NGK3 314 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 OR6N1Q8NGY5 312 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 OR8U1Q8NH10 309 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 APH1BQ8WW43 257 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 NARS2Q96I59 477 aaKnown RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 GSDMAQ96QA5 445 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 TIMM17AQ99595 171 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 SPIN2AQ99865 258 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 SPIN2BQ9BPZ2 258 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 TEKT3Q9BXF9 490 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ZYG11BQ9C0D3 744 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ZDHHC4Q9NPG8 344 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ACP6Q9NPH0 428 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 SIRT7Q9NRC8 400 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 AGPAT4Q9NRZ5 378 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 C20orf96Q9NUD7 363 aaPredicted RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 CLN6Q9NWW5 311 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 TBC1D24Q9ULP9 559 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 RFNGQ9Y644 331 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ROCK2O75116 1388 aaKnown RBP1.93□□□□□ -2.1
RFC4-211ENST00000460408 RFX7Q2KHR2 1363 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 DOPEY2Q9Y3R5 2298 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 ANKRD36CQ5JPF3 1778 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
RFC4-211ENST00000460408 UBN2Q6ZU65 1347 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 LOC400499M0QZD8 3231 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 TRAV25A0A0B4J276 109 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 IGKV1-8A0A0C4DH67 115 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 TMEM150BA6NC51 233 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 TEX46H3BTG2 121 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 WRBO00258 174 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 SLC9A3R1O14745 358 aaPredicted RBP1.92□□□□□ -2.1
RFC4-211ENST00000460408 RBFOX2O43251 390 aaKnown RBP eCLIP1.92□□□□□ -2.1
RFC4-211ENST00000460408 RDH16O75452 317 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 CCNB2O95067 398 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 HBE1P02100 147 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 APCSP02743 223 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 LINC00869P0C866 280 aa1.92□□□□□ -2.1
RFC4-211ENST00000460408 CYBAP13498 195 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms