RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 NUFIP1Q9UHK0 495 aaKnown RBP19.17■□□□□ 0.66
PTPN4-208ENST00000460289 ZNF816-ZNF321PA0A0X1KG74 233 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 CDIPTO14735 213 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 TNFRSF13BO14836 293 aaPredicted RBP19.16■□□□□ 0.66
PTPN4-208ENST00000460289 MUC1P15941 1255 aaPredicted RBP19.16■□□□□ 0.66
PTPN4-208ENST00000460289 ATP6V1E1P36543 226 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 CFHR2P36980 270 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 HOXA4Q00056 320 aaPredicted RBP19.16■□□□□ 0.66
PTPN4-208ENST00000460289 MICBQ29980 383 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 TEX36Q5VZQ5 186 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 WDR82Q6UXN9 313 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 THAP5Q7Z6K1 395 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 ZDHHC23Q8IYP9 409 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 SEMA6DQ8NFY4 1073 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 OR51E1Q8TCB6 317 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 ZFAND2BQ8WV99 257 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 RNF170Q96K19 258 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 MOB1AQ9H8S9 216 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 NUP50Q9UKX7 468 aa19.16■□□□□ 0.66
PTPN4-208ENST00000460289 ADAM20O43506 726 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 MTRF1O75570 445 aaKnown RBP19.15■□□□□ 0.66
PTPN4-208ENST00000460289 OR2T7P0C7T2 308 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 ALDH3A2P51648 485 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 HILS1P60008 231 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 CSNK2BP67870 215 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 RIPPLY1Q0D2K3 151 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 FAM76BQ5HYJ3 339 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 KCTD8Q6ZWB6 473 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 OR2T27Q8NH04 317 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 DACT3Q96B18 629 aaPredicted RBP19.15■□□□□ 0.66
PTPN4-208ENST00000460289 RAB3IPQ96QF0 476 aaPredicted RBP19.15■□□□□ 0.66
PTPN4-208ENST00000460289 NUDT16L1Q9BRJ7 211 aaKnown RBP19.15■□□□□ 0.66
PTPN4-208ENST00000460289 GPR84Q9NQS5 396 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 IMPAD1Q9NX62 359 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 R4GMQ9 66 aa19.15■□□□□ 0.66
PTPN4-208ENST00000460289 LOC110117498-PIK3R3F6TDL0 507 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 EI24O14681 340 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 VENTXO95231 258 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 IGLV3-1P01715 115 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 GYPAP02724 150 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 KRT8P05787 483 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 ZBTB37Q5TC79 503 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 FAM90A1Q86YD7 464 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 OR10Z1Q8NGY1 313 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 FAM71F1Q96KD3 344 aaPredicted RBP19.14■□□□□ 0.65
PTPN4-208ENST00000460289 HRASLS5Q96KN8 279 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 TECTBQ96PL2 329 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 KAAG1Q9UBP8 84 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 GTF2A1LQ9UNN4 478 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 SNX5Q9Y5X3 404 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 STAB1Q9NY15 2570 aa19.14■□□□□ 0.65
PTPN4-208ENST00000460289 MAGEB4O15481 346 aaPredicted RBP19.13■□□□□ 0.65
PTPN4-208ENST00000460289 ENSAO43768 121 aaKnown RBP19.13■□□□□ 0.65
PTPN4-208ENST00000460289 SRSF10O75494 262 aaKnown RBP19.13■□□□□ 0.65
PTPN4-208ENST00000460289 EGR1P18146 543 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 MFGE8Q08431 387 aaPredicted RBP19.13■□□□□ 0.65
PTPN4-208ENST00000460289 C11orf91Q3C1V1 193 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 CEACAM21Q3KPI0 293 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 BCL2L15Q5TBC7 163 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 ELMOD2Q8IZ81 293 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 PPP1R14AQ96A00 147 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 EME1Q96AY2 570 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 C12orf43Q96C57 262 aaKnown RBP19.13■□□□□ 0.65
PTPN4-208ENST00000460289 SLC6A7Q99884 636 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 CTSZQ9UBR2 303 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 MRM2Q9UI43 246 aaKnown RBP19.13■□□□□ 0.65
PTPN4-208ENST00000460289 ENPP5Q9UJA9 477 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 OR52A1Q9UKL2 312 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPN4-208ENST00000460289 DOCK11Q5JSL3 2073 aa19.13■□□□□ 0.65
PTPN4-208ENST00000460289 TMPRSS2O15393 492 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 DHRS3O75911 302 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 RGS9O75916 674 aaPredicted RBP19.12■□□□□ 0.65
PTPN4-208ENST00000460289 TTRP02766 147 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 LIPFP07098 398 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 GNG3P63215 75 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 CBR4Q8N4T8 237 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 YIPF7Q8N8F6 280 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 SCCPDHQ8NBX0 429 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 OR5A2Q8NGI9 324 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 HPSE2Q8WWQ2 592 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 RPL3LQ92901 407 aaKnown RBP19.12■□□□□ 0.65
PTPN4-208ENST00000460289 TBX5Q99593 518 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 C9orf16Q9BUW7 83 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 PIGLQ9Y2B2 252 aa19.12■□□□□ 0.65
PTPN4-208ENST00000460289 IGHV3OR15-7A0A075B7D8 119 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 A0A1W2PQL4 384 aaPredicted RBP19.11■□□□□ 0.65
PTPN4-208ENST00000460289 SRRM5B3KS81 715 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 TRIM77I1YAP6 450 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 SULT1C4O75897 302 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 ZIK1Q3SY52 487 aaPredicted RBP19.11■□□□□ 0.65
PTPN4-208ENST00000460289 KLF17Q5JT82 389 aaPredicted RBP19.11■□□□□ 0.65
PTPN4-208ENST00000460289 SLC25A30Q5SVS4 291 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 MEDAGQ5VYS4 303 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 RBMS3Q6XE24 437 aaKnown RBP19.11■□□□□ 0.65
PTPN4-208ENST00000460289 SLC36A1Q7Z2H8 476 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 OR10H4Q8NGA5 316 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 C22orf15Q8WYQ4 148 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 UPRTQ96BW1 309 aa19.11■□□□□ 0.65
PTPN4-208ENST00000460289 S100A14Q9HCY8 104 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms