RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 CXCR4P61073 352 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 FAM76BQ5HYJ3 339 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 ZNF322Q6U7Q0 402 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-213ENST00000460048 ZDHHC22Q8N966 263 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 HPSE2Q8WWQ2 592 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 PIGCQ92535 297 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 PKP2Q99959 881 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 RTL8AQ9BWD3 113 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 SMURF1Q9HCE7 757 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 ESM1Q9NQ30 184 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 CLN6Q9NWW5 311 aa13.7□□□□□ -0.22
SHANK2-213ENST00000460048 NUFIP1Q9UHK0 495 aaKnown RBP13.7□□□□□ -0.22
SHANK2-213ENST00000460048 IGHV3OR15-7A0A075B7D8 119 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 ZNF816-ZNF321PA0A0X1KG74 233 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 TMEM210A6NLX4 147 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 SRRM5B3KS81 715 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 TRIM77I1YAP6 450 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 CDIPTO14735 213 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 PLATP00750 562 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 TTRP02766 147 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 ATP6V1B1P15313 513 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 MUC1P15941 1255 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-213ENST00000460048 MFGE8Q08431 387 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-213ENST00000460048 KPNB1Q14974 876 aaKnown RBP13.69□□□□□ -0.22
SHANK2-213ENST00000460048 ZNF829Q3KNS6 432 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-213ENST00000460048 CCDC121Q6ZUS5 278 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 ZDHHC23Q8IYP9 409 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 BCL6BQ8N143 479 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-213ENST00000460048 FAM216AQ8WUB2 273 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 PPP1R14AQ96A00 147 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 TECTBQ96PL2 329 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 RBM4BQ9BQ04 359 aaKnown RBP13.69□□□□□ -0.22
SHANK2-213ENST00000460048 RIBC2Q9H4K1 309 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 WARS2Q9UGM6 360 aaKnown RBP13.69□□□□□ -0.22
SHANK2-213ENST00000460048 IKZF2Q9UKS7 526 aa13.69□□□□□ -0.22
SHANK2-213ENST00000460048 ZNF670-ZNF695F2Z2N8 137 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 MAGEB4O15481 346 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-213ENST00000460048 ENSAO43768 121 aaKnown RBP13.68□□□□□ -0.22
SHANK2-213ENST00000460048 IGHV4-38-2P0DP08 117 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 HTR1FP30939 366 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 EGR3Q06889 387 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 POU4F2Q12837 409 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 MICBQ29980 383 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 CD276Q5ZPR3 534 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 C9orf139Q6ZV77 190 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 DOK3Q7L591 496 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 SCCPDHQ8NBX0 429 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 OR51G2Q8NGK0 314 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 OR8J1Q8NGP2 316 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 OR10Z1Q8NGY1 313 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 FAM81AQ8TBF8 368 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 OR51E1Q8TCB6 317 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 RPL3LQ92901 407 aaKnown RBP13.68□□□□□ -0.22
SHANK2-213ENST00000460048 RNF170Q96K19 258 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 ZNF48Q96MX3 618 aaPredicted RBP13.68□□□□□ -0.22
SHANK2-213ENST00000460048 RASSF4Q9H2L5 321 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 GPR84Q9NQS5 396 aa13.68□□□□□ -0.22
SHANK2-213ENST00000460048 MRM2Q9UI43 246 aaKnown RBP13.68□□□□□ -0.22
SHANK2-213ENST00000460048 E9PQ18 207 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 LOC110117498-PIK3R3F6TDL0 507 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 DVL1O14640 695 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 ALPLP05186 524 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 LIPFP07098 398 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 AMY2BP19961 511 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 FGF12P61328 243 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 ELF3P78545 371 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-213ENST00000460048 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 ZBTB37Q5TC79 503 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 ZFP1Q6P2D0 407 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 SSX6Q7RTT6 188 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 SIGLECL1Q8N7X8 197 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 C12orf43Q96C57 262 aaKnown RBP13.67□□□□□ -0.22
SHANK2-213ENST00000460048 SEH1LQ96EE3 360 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 FAM71F1Q96KD3 344 aaPredicted RBP13.67□□□□□ -0.22
SHANK2-213ENST00000460048 MOB1AQ9H8S9 216 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 USE1Q9NZ43 259 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 R4GMQ9 66 aa13.67□□□□□ -0.22
SHANK2-213ENST00000460048 IGHV3OR16-10A0A075B7F0 116 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 TRAV40A0A0B4J280 105 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 A0A1B0GW55 424 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 TMPRSS2O15393 492 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 DHRS3O75911 302 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 OR2T7P0C7T2 308 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 DUX4L2P0CJ85 424 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 DUX4L3P0CJ86 424 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 DUX4L4P0CJ87 422 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 DUX4L5P0CJ88 424 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 DUX4L6P0CJ89 424 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 DUX4L7P0CJ90 424 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 MMP9P14780 707 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 GPM6AP51674 278 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 UBA52P62987 128 aaKnown RBP13.66□□□□□ -0.22
SHANK2-213ENST00000460048 RIPPLY1Q0D2K3 151 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 TMED1Q13445 227 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 CEACAM21Q3KPI0 293 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 WDR38Q5JTN6 314 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 ZNF684Q5T5D7 378 aa13.66□□□□□ -0.22
SHANK2-213ENST00000460048 ATPAF1Q5TC12 328 aaPredicted RBP13.66□□□□□ -0.22
SHANK2-213ENST00000460048 STUMQ69YW2 141 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms