RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PRSS45Q7RTY3 260 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 KRT77Q7Z794 578 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 COMMD2Q86X83 199 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 CPOQ8IVL8 374 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 HS3ST5Q8IZT8 346 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 FAM216BQ8N7L0 139 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 PIGCQ92535 297 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 FAM71F1Q96KD3 344 aaPredicted RBP13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 SIRPDQ9H106 197 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 ACOXLQ9NUZ1 547 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 ZNF319Q9P2F9 582 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 KAAG1Q9UBP8 84 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 RPUSD1Q9UJJ7 312 aaKnown RBP13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 LAMP5Q9UJQ1 280 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 MPC1Q9Y5U8 109 aa13.02□□□□□ -0.33
CHCHD3-204ENST00000457942 IGHV1-69DA0A0B4J2H0 117 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 A0A1B0GW55 424 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 TNFRSF13BO14836 293 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 IGHV1-69P01742 117 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 MELTFP08582 738 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4L2P0CJ85 424 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4L3P0CJ86 424 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4L4P0CJ87 422 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4L5P0CJ88 424 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4L6P0CJ89 424 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4L7P0CJ90 424 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 ANXA8P13928 327 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 HOXB6P17509 224 aaKnown RBP13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 RAG2P55895 527 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 PSMA6P60900 246 aaKnown RBP13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 ELF3P78545 371 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4L9Q6RFH8 374 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 Q6YL49 198 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 C11orf53Q8IXP5 236 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 ZDHHC23Q8IYP9 409 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 CMTM4Q8IZR5 234 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 FGFRL1Q8N441 504 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 BBS1Q8NFJ9 593 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 OR4F5Q8NH21 305 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 H1FXQ92522 213 aaKnown RBP13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 RPL3LQ92901 407 aaKnown RBP13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 ITPKCQ96DU7 683 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 SEH1LQ96EE3 360 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 HIST1H2AAQ96QV6 131 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 CHIAQ9BZP6 476 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 CNTD2Q9H8S5 307 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 ABCB9Q9NP78 766 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 SNTG1Q9NSN8 517 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 DUX4Q9UBX2 424 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 KLHDC2Q9Y2U9 406 aa13.01□□□□□ -0.33
CHCHD3-204ENST00000457942 TMEM210A6NLX4 147 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 FKBP6O75344 327 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 ATP5HO75947 161 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 KNG1P01042 644 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 MRPL3P09001 348 aaKnown RBP13□□□□□ -0.33
CHCHD3-204ENST00000457942 PRKACGP22612 351 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 APOFQ13790 326 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 SNAPC1Q16533 368 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 LRRC10Q5BKY1 277 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 SLC35D3Q5M8T2 416 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 BRICD5Q6PL45 260 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 C17orf107Q6ZR85 190 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 VMO1Q7Z5L0 202 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 GALNT4Q8N4A0 578 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 KIR3DL3Q8N743 410 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 OR5T2Q8NGG2 359 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 OR8B12Q8NGG6 310 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 TBC1D15Q8TC07 691 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 SSMEM1Q8WWF3 244 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 WFDC12Q8WWY7 111 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 C12orf43Q96C57 262 aaKnown RBP13□□□□□ -0.33
CHCHD3-204ENST00000457942 RNF170Q96K19 258 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 SLITRK2Q9H156 845 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 NIPAL2Q9H841 368 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 BEX1Q9HBH7 125 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 FAM96BQ9Y3D0 163 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 LRP12Q9Y561 859 aa13□□□□□ -0.33
CHCHD3-204ENST00000457942 A0A1B0GVI7 797 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 TCRBV3S1A0A5B6 114 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 PSMD9O00233 223 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 AKR7A2O43488 359 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 ACKR3P25106 362 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 RASSF2P50749 326 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 CDK5Q00535 292 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 C11orf91Q3C1V1 193 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 CDONQ4KMG0 1287 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 LCN1P1Q5VSP4 162 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 CCDC121Q6ZUS5 278 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 TMEM86BQ8N661 226 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 PAPD5Q8NDF8 572 aaKnown RBP12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 TTTY10Q9BZA0 68 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 TLNRD1Q9H1K6 362 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 PRDM13Q9H4Q3 707 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 SIRT7Q9NRC8 400 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 HAO2Q9NYQ3 351 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 TVP23BQ9NYZ1 205 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 DNAJB9Q9UBS3 223 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 ZNF391Q9UJN7 358 aa12.99□□□□□ -0.33
CHCHD3-204ENST00000457942 KPTNQ9Y664 436 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms