RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 ZNF850A8MQ14 1090 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 LGALS8O00214 317 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 MTRF1O75570 445 aaKnown RBP14.5□□□□□ -0.09
USP39-208ENST00000455732 DHRS3O75911 302 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 AVPP01185 164 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 LHBP01229 141 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 WNT2P09544 360 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 ZFP36P26651 326 aaKnown RBP14.5□□□□□ -0.09
USP39-208ENST00000455732 CFHR2P36980 270 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 ZNF85Q03923 595 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 RIPPLY1Q0D2K3 151 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 KCNJ8Q15842 424 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 ESCO2Q56NI9 601 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 FAM76BQ5HYJ3 339 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 COMMD2Q86X83 199 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 C11orf53Q8IXP5 236 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 TEX29Q8N6K0 151 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 YIPF7Q8N8F6 280 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 HPSE2Q8WWQ2 592 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 PPP1R14AQ96A00 147 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 FAM71F1Q96KD3 344 aaPredicted RBP14.5□□□□□ -0.09
USP39-208ENST00000455732 Q96MT0 163 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 EXOGQ9Y2C4 368 aaKnown RBP14.5□□□□□ -0.09
USP39-208ENST00000455732 PCDHGB1Q9Y5G3 927 aa14.5□□□□□ -0.09
USP39-208ENST00000455732 RPS2P15880 293 aaKnown RBP14.49□□□□□ -0.09
USP39-208ENST00000455732 CCL1P22362 96 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 SEC61A1P61619 476 aaKnown RBP14.49□□□□□ -0.09
USP39-208ENST00000455732 LCN2P80188 198 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 ZNF91Q05481 1191 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 KRTAP24-1Q3LI83 254 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 CDONQ4KMG0 1287 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 DCAF12L2Q5VW00 463 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 FAHD2BQ6P2I3 314 aaPredicted RBP14.49□□□□□ -0.09
USP39-208ENST00000455732 ZNF826PQ6ZT77 177 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 NLRC3Q7RTR2 1065 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 FAM220AQ7Z4H9 259 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 CATSPERDQ86XM0 798 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 GCSAMQ8N6F7 178 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 PIGCQ92535 297 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 RORBQ92753 470 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 NEIL1Q96FI4 390 aaPredicted RBP14.49□□□□□ -0.09
USP39-208ENST00000455732 FAHD2AQ96GK7 314 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 TMPRSS13Q9BYE2 586 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 FGF23Q9GZV9 251 aaPredicted RBP14.49□□□□□ -0.09
USP39-208ENST00000455732 GTF2A1LQ9UNN4 478 aa14.49□□□□□ -0.09
USP39-208ENST00000455732 TRAV38-1A0A0B4J264 116 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 A0A1B0GTI1 187 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 hCG_1807616A0A1W2PRN6 198 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 OOEPA6NGQ2 149 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 RPP14O95059 124 aaKnown RBP14.48□□□□□ -0.09
USP39-208ENST00000455732 DBTP11182 482 aaKnown RBP14.48□□□□□ -0.09
USP39-208ENST00000455732 PEX2P28328 305 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 CSNK2BP67870 215 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 SRSF2Q01130 221 aaKnown RBP14.48□□□□□ -0.09
USP39-208ENST00000455732 CEACAM21Q3KPI0 293 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 TEX36Q5VZQ5 186 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 TMEM42Q69YG0 159 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 WDR82Q6UXN9 313 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 DOK3Q7L591 496 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 KCTD20Q7Z5Y7 419 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 THAP5Q7Z6K1 395 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 ZNF555Q8NEP9 628 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 OR8B3Q8NGG8 313 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 APH1BQ8WW43 257 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 LGALS12Q96DT0 336 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 OR8B2Q96RD0 313 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 SSBP3Q9BWW4 388 aaPredicted RBP14.48□□□□□ -0.09
USP39-208ENST00000455732 ACOXLQ9NUZ1 547 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 AASSQ9UDR5 926 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 ENPP5Q9UJA9 477 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 PIGLQ9Y2B2 252 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 V9GYS6 101 aa14.48□□□□□ -0.09
USP39-208ENST00000455732 OR5B21A6NL26 309 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 ANKRD65E5RJM6 399 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 TNFRSF13BO14836 293 aaPredicted RBP14.47□□□□□ -0.09
USP39-208ENST00000455732 CASQ2O14958 399 aaPredicted RBP14.47□□□□□ -0.09
USP39-208ENST00000455732 NDUFA2O43678 99 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 FAHP16930 419 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 CD80P33681 288 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 PSMB10P40306 273 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 HOXA4Q00056 320 aaPredicted RBP14.47□□□□□ -0.09
USP39-208ENST00000455732 EGFL6Q8IUX8 553 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 ACBD7Q8N6N7 88 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 CCDC54Q8NEL0 328 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 OR10Z1Q8NGY1 313 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 OR14K1Q8NGZ2 314 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 LRRC29Q8WV35 223 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 RNF166Q96A37 237 aaPredicted RBP14.47□□□□□ -0.09
USP39-208ENST00000455732 HIST1H2AAQ96QV6 131 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 METTL17Q9H7H0 456 aaPredicted RBP14.47□□□□□ -0.09
USP39-208ENST00000455732 MRPS18AQ9NVS2 196 aaKnown RBP14.47□□□□□ -0.09
USP39-208ENST00000455732 METRNQ9UJH8 293 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 GNG8Q9UK08 70 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 SLC22A13Q9Y226 551 aa14.47□□□□□ -0.09
USP39-208ENST00000455732 DAPL1A0PJW8 107 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 SRRM5B3KS81 715 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 C3orf80F5H4A9 247 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 P2RY10O00398 339 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 CDIPTO14735 213 aa14.46□□□□□ -0.09
USP39-208ENST00000455732 IGHA1P01876 353 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms