RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TMEM165Q9HC07 324 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 AMBNQ9NP70 447 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 FGF20Q9NP95 211 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-205ENST00000454542 UFSP2Q9NUQ7 469 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 RNF7Q9UBF6 113 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 GNG8Q9UK08 70 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 SLC22A13Q9Y226 551 aa11.88□□□□□ -0.51
HDAC4-205ENST00000454542 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-205ENST00000454542 RPL36Q9Y3U8 105 aaKnown RBP11.88□□□□□ -0.51
HDAC4-205ENST00000454542 PPIAL4EA0A075B759 164 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 DAPL1A0PJW8 107 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 ANXA2P2A6NMY6 339 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 ZNF850A8MQ14 1090 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 PPIAL4DF5H284 164 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 H0YJX3 145 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 MTRF1O75570 445 aaKnown RBP11.87□□□□□ -0.51
HDAC4-205ENST00000454542 RPP14O95059 124 aaKnown RBP11.87□□□□□ -0.51
HDAC4-205ENST00000454542 FADS2O95864 444 aaKnown RBP11.87□□□□□ -0.51
HDAC4-205ENST00000454542 TGFAP01135 160 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 LHBP01229 141 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 GNAO1P09471 354 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 UBCP0CG48 685 aaKnown RBP11.87□□□□□ -0.51
HDAC4-205ENST00000454542 PPIAL4FP0DN26 164 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 FAHP16930 419 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 THBS2P35442 1172 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 CFHR2P36980 270 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 OR12D2P58182 307 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 CSNK2BP67870 215 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 RIPPLY1Q0D2K3 151 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 GALEQ14376 348 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 FAM201AQ5SY85 155 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 DOK3Q7L591 496 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 CCDC54Q8NEL0 328 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 OR2G2Q8NGZ5 317 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 TMEM186Q96B77 213 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 PELI1Q96FA3 418 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 MICU1Q9BPX6 476 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 ALG8Q9BVK2 526 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 RTL8AQ9BWD3 113 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 VCXQ9H320 206 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 ERVK13-1Q9NX77 482 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 LPAR3Q9UBY5 353 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 ENPP5Q9UJA9 477 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 PPIAL4AQ9Y536 164 aa11.87□□□□□ -0.51
HDAC4-205ENST00000454542 TRAV20A0A0B4J274 112 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 PPIAL4CA0A0B4J2A2 164 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-205ENST00000454542 SRRM5B3KS81 715 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-205ENST00000454542 P2RY10O00398 339 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 LIMS3P0CW19 117 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 LIMS4P0CW20 117 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 IRF2P14316 349 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 EGR1P18146 543 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 CCR9P51686 369 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 NANOS3P60323 173 aaKnown RBP11.86□□□□□ -0.51
HDAC4-205ENST00000454542 HOXA4Q00056 320 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-205ENST00000454542 CEACAM21Q3KPI0 293 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 KRTAP21-3Q3LHN1 58 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 LAIR2Q6ISS4 152 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 ZNF826PQ6ZT77 177 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 GLCCI1Q86VQ1 547 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 COMMD2Q86X83 199 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 KLHL36Q8N4N3 616 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 PIGCQ92535 297 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 TFAP2CQ92754 450 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 TMEM246Q9BRR3 403 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 C1orf123Q9NWV4 160 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 UBAP1Q9NZ09 502 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 GTF2A1LQ9UNN4 478 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 PIGLQ9Y2B2 252 aa11.86□□□□□ -0.51
HDAC4-205ENST00000454542 LOC107986453A0A1B0GWG9 222 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 OR5B21A6NL26 309 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 A6NLC8 198 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 LGALS8O00214 317 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 TNFRSF13BO14836 293 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 PLPP2O43688 288 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 ISG15P05161 165 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 GRPP07492 148 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 PIPP12273 146 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 PCMT1P22061 227 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 PSMB10P40306 273 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 SEC61A1P61619 476 aaKnown RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 GNG3P63215 75 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 MRPL28Q13084 256 aaKnown RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 CR1LQ2VPA4 569 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 KLHL22Q53GT1 634 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 DCDC5Q6ZRR9 648 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 C8orf59Q8N0T1 100 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 OR10Z1Q8NGY1 313 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 RPS4Y2Q8TD47 263 aa11.85□□□□□ -0.51
HDAC4-205ENST00000454542 DACT3Q96B18 629 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 MRPL48Q96GC5 212 aaKnown RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 MYCBPQ99417 103 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-205ENST00000454542 HIF1ANQ9NWT6 349 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms