RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 R3HDM4Q96D70 268 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CLPTM1LQ96KA5 538 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C7orf34Q96L11 122 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DHRS1Q96LJ7 313 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF488Q96MN9 340 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CITED2Q99967 270 aaPredicted RBP4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BTBD10Q9BSF8 475 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ANKRD19PQ9H560 264 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF702PQ9H963 129 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TBC1D23Q9NUY8 699 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 VNN3Q9NY84 501 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC25A10Q9UBX3 287 aaPredicted RBP4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KLHDC2Q9Y2U9 406 aa4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAM32AQ9Y421 112 aaKnown RBP4.87□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HTR3EA5X5Y0 456 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAM183AA6NL82 134 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF850A8MQ14 1090 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF878C9JN71 531 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 H0YAE9 185 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 K7EIL1 84 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ARPC3O15145 178 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GPR37O15354 613 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GADD45GO95257 159 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ECDO95905 644 aaPredicted RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SEMG1P04279 462 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SPI1P17947 270 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RHCEP18577 417 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 POU1F1P28069 291 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GNALP38405 381 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GABRA2P47869 451 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GSK3AP49840 483 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ENTPD1P49961 510 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GPM6AP51674 278 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CAPZA1P52907 286 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LOXL3P58215 753 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GUCA2AQ02747 115 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PRDX4Q13162 271 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 EIF2B1Q14232 305 aaKnown RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF273Q14593 569 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LRRC10Q5BKY1 277 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CEP78Q5JTW2 689 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LDLRAD2Q5SZI1 272 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FOXB2Q5VYV0 432 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 METTL21CQ5VZV1 264 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C8orf82Q6P1X6 216 aaPredicted RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CRIP3Q6Q6R5 217 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 METAP1DQ6UB28 335 aaPredicted RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DRAM2Q6UX65 266 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC36A1Q7Z2H8 476 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ERI1Q8IV48 349 aaKnown RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GALNT4Q8N4A0 578 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BEND2Q8NDZ0 799 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR4M1Q8NGD0 313 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR52L1Q8NGH7 329 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR6N2Q8NGY6 317 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR5R1Q8NH85 324 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CFHR4Q92496 578 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OTULINQ96BN8 352 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LYZL4Q96KX0 146 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RAB3IPQ96QF0 476 aaPredicted RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SIKE1Q9BRV8 207 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC22A4Q9H015 551 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 METTL8Q9H825 291 aaKnown RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 YY1AP1Q9H869 796 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SP140LQ9H930 580 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KRCC1Q9NPI7 259 aaPredicted RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TRIM36Q9NQ86 728 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SERTAD4Q9NUC0 356 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NECAP2Q9NVZ3 263 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C14orf119Q9NWQ9 140 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HAO2Q9NYQ3 351 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KAAG1Q9UBP8 84 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NOP16Q9Y3C1 178 aaKnown RBP4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CDH10Q9Y6N8 788 aa4.86□□□□□ -1.63
HLA-DPA3-207ENST00000454398 WI2-2373I1.2A0A1W2PRP0 233 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SH2D7A6NKC9 451 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR2AT4A6NND4 320 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PSMD9O00233 223 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF593O00488 134 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ARPC2O15144 300 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SIGLEC5O15389 551 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 XRCC2O43543 280 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NDUFA2O43678 99 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SELENOFO60613 162 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NPPAP01160 153 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MUC1P15941 1255 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ATP6V1B2P21281 511 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HSD11B1P28845 292 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HOXD3P31249 432 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NAA10P41227 235 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GSSP48637 474 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 UBE2E1P51965 193 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GTF2A1P52655 376 aaPredicted RBP4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PSME3P61289 254 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KRT72Q14CN4 511 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZSCAN26Q16670 478 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KHDC1LQ5JSQ8 128 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NCR3LG1Q68D85 454 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C10orf99Q6UWK7 81 aa4.85□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PRSS45Q7RTY3 260 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms