RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SUPT3HB4E1H0 165 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 TRDCB7Z8K6 153 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 TEX46H3BTG2 121 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 L7N2F9 121 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CXCL13O43927 109 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 PRKYO43930 277 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 SUPT3HO75486 399 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 STK16O75716 305 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 UGT2B17O75795 530 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 VENTXO95231 258 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 SLC2A10O95528 541 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CD55P08174 381 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 MELTFP08582 738 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 HOXD4P09016 255 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CT62P0C5K7 136 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CCDC166P0CW27 439 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 GABRA1P14867 456 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CNR1P21554 472 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CPN2P22792 545 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 SERPINB1P30740 379 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CRYBB2P43320 205 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 DAP3P51398 398 aaKnown RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 PRKXP51817 358 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 NUP107P57740 925 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 TAS2R39P59534 338 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 RAB10P61026 200 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 ATP6V0D1P61421 351 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 GNG11P61952 73 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 KCNJ2P63252 427 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 BIKQ13323 160 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 DOC2AQ14183 400 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 MRPL23Q16540 153 aaKnown RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 DUSP7Q16829 419 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 SLC25A35Q3KQZ1 300 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 NHLRC3Q5JS37 347 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CDKL4Q5MAI5 379 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 MED27Q6P2C8 311 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 SPNS3Q6ZMD2 512 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 C16orf47Q6ZP98 133 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 EIF3MQ7L2H7 374 aaKnown RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CTAGE3PQ8IX95 158 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 ZBED8Q8IZ13 594 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 ZNF321PQ8N8H1 164 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 ACOT4Q8N9L9 421 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 ZNF485Q8NCK3 441 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 OR6T1Q8NGN1 323 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 OR8K3Q8NH51 312 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 STAG3L4Q8TBR4 150 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 PAQR8Q8TEZ7 354 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CMTM7Q96FZ5 175 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 PLEKHA8Q96JA3 519 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 JSRP1Q96MG2 331 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 TBX15Q96SF7 602 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 NAPGQ99747 312 aaPredicted RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 MAPKAP1Q9BPZ7 522 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 PELOQ9BRX2 385 aaKnown RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 UCK2Q9BZX2 261 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 SLITRK2Q9H156 845 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 CAB39LQ9H9S4 337 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 MS4A12Q9NXJ0 267 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 DHRS4-AS1Q9P1J3 65 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 OPTCQ9UBM4 332 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 WARS2Q9UGM6 360 aaKnown RBP3.37□□□□□ -1.87
LINC00393-202ENST00000452852 PHF11Q9UIL8 331 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 RIMS3Q9UJD0 308 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 SAR1BQ9Y6B6 198 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 NINQ8N4C6 2090 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 PCNX1Q96RV3 2341 aa3.37□□□□□ -1.87
LINC00393-202ENST00000452852 MED13LQ71F56 2210 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 A0A0G2JMM0 328 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 A0A1W2PPB8 328 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 A0A1W2PRS3 328 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 PINLYPA6NC86 204 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 KIR3DP1A8MWS1 328 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 C4orf51C9J302 202 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 C9JVG2 144 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 E7ESA3 106 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 SULT2B1O00204 365 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 DLGAP1O14490 977 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 EIF3HO15372 352 aaKnown RBP eCLIP3.36□□□□□ -1.87
LINC00393-202ENST00000452852 AKR7A2O43488 359 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 HCN1O60741 890 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 SH3BGRLO75368 114 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 GPX5O75715 221 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 TRAPPC6AO75865 159 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 GLSO94925 669 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-202ENST00000452852 TBX6O95947 436 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-202ENST00000452852 CCL3P10147 92 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 GFAPP14136 432 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 KITLGP21583 273 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 HIST1H1TP22492 207 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-202ENST00000452852 IVDP26440 423 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 GDF1P27539 372 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 CRABP2P29373 138 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 GCKP35557 465 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 DNASE1L1P49184 302 aa3.36□□□□□ -1.87
LINC00393-202ENST00000452852 TMED10P49755 219 aaKnown RBP3.36□□□□□ -1.87
LINC00393-202ENST00000452852 RGS8P57771 180 aaPredicted RBP3.36□□□□□ -1.87
LINC00393-202ENST00000452852 TFF3Q07654 80 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms