RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 DEFB112Q30KQ8 113 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 FAM76BQ5HYJ3 339 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 WDR38Q5JTN6 314 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 GPR157Q5UAW9 335 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 DEGS2Q6QHC5 323 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 KRT74Q7RTS7 529 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 FGFRL1Q8N441 504 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 PNLDC1Q8NA58 520 aaKnown RBP10.32□□□□□ -0.76
CPSF4-208ENST00000452047 OR5K1Q8NHB7 308 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 OR5P3Q8WZ94 311 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 SLC25A28Q96A46 364 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 C12orf43Q96C57 262 aaKnown RBP10.32□□□□□ -0.76
CPSF4-208ENST00000452047 SEH1LQ96EE3 360 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 WDFY2Q96P53 400 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 PKP2Q99959 881 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 MICU1Q9BPX6 476 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 PCGF1Q9BSM1 259 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 RTL8AQ9BWD3 113 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 TEX12Q9BXU0 123 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 SIRPDQ9H106 197 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 ABCB9Q9NP78 766 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 FAM206AQ9NX38 181 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 COPS3Q9UNS2 423 aa10.32□□□□□ -0.76
CPSF4-208ENST00000452047 A0A0U1RQV5 110 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 TMEM210A6NLX4 147 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 ZNF850A8MQ14 1090 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 PSMD9O00233 223 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 P2RY10O00398 339 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 TOX4O94842 621 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 ECDO95905 644 aaPredicted RBP10.31□□□□□ -0.76
CPSF4-208ENST00000452047 IGLV3-1P01715 115 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 MRPL3P09001 348 aaKnown RBP10.31□□□□□ -0.76
CPSF4-208ENST00000452047 AMY2BP19961 511 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 EPHA2P29317 976 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 DCTDP32321 178 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 ESRRGP62508 458 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 ATP6AP1Q15904 470 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 RUSC1-AS1Q66K80 236 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 STUMQ69YW2 141 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 BTN2A1Q7KYR7 527 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 KRT77Q7Z794 578 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 FAM216BQ8N7L0 139 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 OR10Z1Q8NGY1 313 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 CCL13Q99616 98 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 WDR13Q9H1Z4 485 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
CPSF4-208ENST00000452047 PCDHGB1Q9Y5G3 927 aa10.31□□□□□ -0.76
CPSF4-208ENST00000452047 CENPVL3A0A0U1RRI6 287 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 TMEM269A0A1B0GVZ9 245 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ACOD1A6NK06 481 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ZAR1LA6NP61 321 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 M0R129 80 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 HOXA3O43365 443 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-208ENST00000452047 MITFO75030 526 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-208ENST00000452047 EFNB1P98172 346 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ATPAF1Q5TC12 328 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-208ENST00000452047 LCN1P1Q5VSP4 162 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 METTL11BQ5VVY1 283 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 SLX4IPQ5VYV7 408 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 KDM4DQ6B0I6 523 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 KCTD18Q6PI47 426 aaPredicted RBP10.3□□□□□ -0.76
CPSF4-208ENST00000452047 SLC36A1Q7Z2H8 476 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 BCDIN3DQ7Z5W3 292 aaKnown RBP10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ZDHHC23Q8IYP9 409 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ZNF679Q8IYX0 411 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 SCCPDHQ8NBX0 429 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ST8SIA4Q92187 359 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 PIGCQ92535 297 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 RPL3LQ92901 407 aaKnown RBP10.3□□□□□ -0.76
CPSF4-208ENST00000452047 OR8B4Q96RC9 309 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 CNN2Q99439 309 aaKnown RBP10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ZNF747Q9BV97 191 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 GABARAPL1Q9H0R8 117 aa10.3□□□□□ -0.76
CPSF4-208ENST00000452047 ZNF816-ZNF321PA0A0X1KG74 233 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 G3V2T6 193 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 ZNF254O75437 659 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 SRSF10O75494 262 aaKnown RBP10.29□□□□□ -0.76
CPSF4-208ENST00000452047 SELLP14151 372 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 MAP2K3P46734 347 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 TGM4P49221 684 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 ARF6P62330 175 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 MFGE8Q08431 387 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-208ENST00000452047 PDCD1Q15116 288 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 AADACL4Q5VUY2 407 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 C12orf73Q69YU5 71 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 Q6YL49 198 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 MEPCEQ7L2J0 689 aaKnown RBP10.29□□□□□ -0.76
CPSF4-208ENST00000452047 SGMS2Q8NHU3 365 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 GATAD2BQ8WXI9 593 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 ASB17Q8WXJ9 295 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 TAF15Q92804 592 aaKnown RBP eCLIP10.29□□□□□ -0.76
CPSF4-208ENST00000452047 ITFG2Q969R8 447 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 DUS3LQ96G46 650 aaKnown RBP10.29□□□□□ -0.76
CPSF4-208ENST00000452047 RNF170Q96K19 258 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 RAB3IPQ96QF0 476 aaPredicted RBP10.29□□□□□ -0.76
CPSF4-208ENST00000452047 MROQ9BYG7 248 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 TTTY10Q9BZA0 68 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 PRRG3Q9BZD7 231 aa10.29□□□□□ -0.76
CPSF4-208ENST00000452047 PBOV1Q9GZY1 135 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms