RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 EXO5Q9H790 373 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 PNRC2Q9NPJ4 139 aaKnown RBP10.65□□□□□ -0.7
COL27A1-202ENST00000451716 KLK13Q9UKR3 277 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 NPTNQ9Y639 398 aa10.65□□□□□ -0.7
COL27A1-202ENST00000451716 STK17BO94768 372 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 LPLP06858 475 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 ADH6P28332 368 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 TMED4Q7Z7H5 227 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 YRDCQ86U90 279 aaKnown RBP10.64□□□□□ -0.71
COL27A1-202ENST00000451716 MUC20Q8N307 709 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF283Q8N7M2 679 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 PAQR8Q8TEZ7 354 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 ROBO4Q8WZ75 1007 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF837Q96EG3 531 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-202ENST00000451716 SEBOXQ9HB31 216 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-202ENST00000451716 GPN1Q9HCN4 374 aaPredicted RBP10.64□□□□□ -0.71
COL27A1-202ENST00000451716 TMEM138Q9NPI0 162 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 C9orf170A2RU37 121 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 CD37P11049 281 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF20P17024 532 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 CX3CR1P49238 355 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 H3F3AP84243 136 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 Q0VFX4 171 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 TRA2AQ13595 282 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL27A1-202ENST00000451716 HIST3H3Q16695 136 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 SCGB2B2Q4G0G5 96 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 ETFRF1Q6IPR1 90 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 ANGPTL5Q86XS5 388 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 OR5D14Q8NGL3 314 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 M1APQ8TC57 530 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 RHBDD1Q8TEB9 315 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 NUDCD2Q8WVJ2 157 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 MISP3Q96FF7 219 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 EDEM2Q9BV94 578 aa10.64□□□□□ -0.71
COL27A1-202ENST00000451716 FAM186AA6NE01 2351 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 A0A0J9YW62 118 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 F5H5K5 113 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 RAB27BO00194 218 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 AMY2AP04746 511 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 VSIG8P0DPA2 414 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 LIPCP11150 499 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF17P17021 662 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 TCN2P20062 427 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 H2BFSP57053 126 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 MLF1P58340 268 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 C1orf185Q5T7R7 199 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 AWAT2Q6E213 333 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 OR52W1Q6IF63 320 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 SLC23A3Q6PIS1 610 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 CD163Q86VB7 1156 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 DTX1Q86Y01 620 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 BVESQ8NE79 360 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 NPRL2Q8WTW4 380 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 UTP23Q9BRU9 249 aaKnown RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 NICN1Q9BSH3 213 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 RBM24Q9BX46 236 aaKnown RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 MRPL37Q9BZE1 423 aaKnown RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 A0A1W2PP11 408 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 OR5H15A6NDH6 313 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 CYB5AP00167 134 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 GNB3P16520 340 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF93P35789 620 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 CSNK1A1P48729 337 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 DSCR4P56555 118 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 ACTBP60709 375 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 ACTG1P63261 375 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 DCAF12L2Q5VW00 463 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 HAGHLQ6PII5 290 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 ETV3LQ6ZN32 361 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 TIPARPQ7Z3E1 657 aaKnown RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF101Q8IZC7 436 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 TCEAL7Q9BRU2 100 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 SRXN1Q9BYN0 137 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 FAM117AQ9C073 453 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 POFUT1Q9H488 388 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 FRYQ5TBA9 3013 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 NPIPA2E9PIF3 369 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 NPIPA3F8WFD2 350 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 IL5P05113 134 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 CPN1P15169 458 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 SLC6A9P48067 706 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 TAS2R19P59542 299 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 SMCO1Q147U7 214 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 RGS7BPQ6MZT1 257 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 FJX1Q86VR8 437 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 SLC22A24Q8N4F4 322 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 TMEM104Q8NE00 496 aa10.63□□□□□ -0.71
COL27A1-202ENST00000451716 LIN37Q96GY3 246 aaPredicted RBP10.63□□□□□ -0.71
COL27A1-202ENST00000451716 DMXL1Q9Y485 3027 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF736B4DX44 427 aaPredicted RBP10.62□□□□□ -0.71
COL27A1-202ENST00000451716 GOSR2O14653 212 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 TLX3O43711 291 aaPredicted RBP10.62□□□□□ -0.71
COL27A1-202ENST00000451716 CIDEAO60543 219 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 PMS2P2O95744 297 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 CYC1P08574 325 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 FGF2P09038 288 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 RFPL3SP0C7P2 107 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 OR3A4PP47883 348 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 CDNFQ49AH0 187 aa10.62□□□□□ -0.71
COL27A1-202ENST00000451716 PPP1R32Q7Z5V6 425 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms