RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ZCCHC18P0CG32 403 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 BRS3P32247 399 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 CDX1P47902 265 aaPredicted RBP6.14□□□□□ -1.43
LINC01961-201ENST00000449954 CCT5P48643 541 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 POU3F4P49335 361 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 CTXN1P60606 82 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 RPL31P62899 125 aaKnown RBP6.14□□□□□ -1.43
LINC01961-201ENST00000449954 PCLAFQ15004 111 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 LGALS9CQ6DKI2 356 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 CD300LDQ6UXZ3 194 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 ZNF782Q6ZMW2 699 aaPredicted RBP6.14□□□□□ -1.43
LINC01961-201ENST00000449954 DPY19L4Q7Z388 723 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 CALHM1Q8IU99 346 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 DRAM1Q8N682 238 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 TMEM185AQ8NFB2 350 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 OR5T2Q8NGG2 359 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 OR8S1Q8NH09 359 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 ANGPTL6Q8NI99 470 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 BCAS4Q8TDM0 211 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 SEH1LQ96EE3 360 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 RAB3IPQ96QF0 476 aaPredicted RBP6.14□□□□□ -1.43
LINC01961-201ENST00000449954 PITX2Q99697 317 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 TPT1P8Q9HAU6 139 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 ELL3Q9HB65 397 aaPredicted RBP6.14□□□□□ -1.43
LINC01961-201ENST00000449954 HILPDAQ9Y5L2 63 aa6.14□□□□□ -1.43
LINC01961-201ENST00000449954 GGT3PA6NGU5 568 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 RER1O15258 196 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 TPST1O60507 370 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 OR7A10O76100 309 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 RBP4P02753 201 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 MT-ND1P03886 318 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 CTLA4P16410 223 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 GCAP28676 217 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 MXRA7P84157 204 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 FADDQ13158 208 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 SNAPC1Q16533 368 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 ALG10Q5BKT4 473 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 LDLRAD2Q5SZI1 272 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 C8orf74Q6P047 294 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 TEX38Q6PEX7 206 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 TMEM65Q6PI78 240 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 C11orf53Q8IXP5 236 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 SPATA4Q8NEY3 305 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 GJC3Q8NFK1 279 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 OR1M1Q8NGA1 313 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 MOSPD2Q8NHP6 518 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 NDNFQ8TB73 568 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 C4orf3Q8WVX3 66 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 LIPHQ8WWY8 451 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 MAL2Q969L2 176 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 MCHR1Q99705 422 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 RAD21L1Q9H4I0 556 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 OPA3Q9H6K4 179 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 C19orf12Q9NSK7 152 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 PSMC3IPQ9P2W1 217 aaPredicted RBP6.13□□□□□ -1.43
LINC01961-201ENST00000449954 POLR1DQ9Y2S0 133 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 KIAA2026Q5HYC2 2103 aa6.13□□□□□ -1.43
LINC01961-201ENST00000449954 TEX13CA0A0J9YWL9 993 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 A0A1W2PPM1 405 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 TRAPPC13A5PLN9 417 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CXorf65A6NEN9 183 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 SH2D7A6NKC9 451 aaPredicted RBP6.12□□□□□ -1.43
LINC01961-201ENST00000449954 OR2AT4A6NND4 320 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 SERPINE3A8MV23 424 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 AHCYL1O43865 530 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 SAP30O75446 220 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 ANP32DO95626 131 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 LCATP04180 440 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 ACSM4P0C7M7 580 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 FUT1P19526 365 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 SDHAP31040 664 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CSNK2BP67870 215 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 DYNC1I2Q13409 638 aaKnown RBP6.12□□□□□ -1.43
LINC01961-201ENST00000449954 RGNQ15493 299 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 KRTAP27-1Q3LI81 207 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CXorf66Q5JRM2 361 aaPredicted RBP6.12□□□□□ -1.43
LINC01961-201ENST00000449954 ENTPD8Q5MY95 495 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 TMEM200BQ69YZ2 307 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 ACSM6Q6P461 480 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 PGM2L1Q6PCE3 622 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CFAP77Q6ZQR2 320 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.12□□□□□ -1.43
LINC01961-201ENST00000449954 WDR86Q86TI4 376 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CYB561A3Q8NBI2 242 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 ZNRF1Q8ND25 227 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 OR10Z1Q8NGY1 313 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CCDC140Q96MF4 163 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 NOL4LQ96MY1 436 aaPredicted RBP6.12□□□□□ -1.43
LINC01961-201ENST00000449954 TLNRD1Q9H1K6 362 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 GRPEL1Q9HAV7 217 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 MEPEQ9NQ76 525 aaPredicted RBP6.12□□□□□ -1.43
LINC01961-201ENST00000449954 SNTG1Q9NSN8 517 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CHCHD3Q9NX63 227 aaKnown RBP6.12□□□□□ -1.43
LINC01961-201ENST00000449954 NLKQ9UBE8 527 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 SLC7A7Q9UM01 511 aa6.12□□□□□ -1.43
LINC01961-201ENST00000449954 CPSF4LA6NMK7 179 aaKnown RBP6.11□□□□□ -1.43
LINC01961-201ENST00000449954 C17orf98A8MV24 154 aa6.11□□□□□ -1.43
LINC01961-201ENST00000449954 IMPA2O14732 288 aa6.11□□□□□ -1.43
LINC01961-201ENST00000449954 PTP4A3O75365 173 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms