RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	CDC42	P60953	191 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	PAX2	Q02962	417 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	PAX8	Q06710	450 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	MFGE8	Q08431	387 aa	Predicted RBP	13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	POU4F2	Q12837	409 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	BCL2L15	Q5TBC7	163 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	CD276	Q5ZPR3	534 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	WDR82	Q6UXN9	313 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	RBMS3	Q6XE24	437 aa	Known RBP	13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	USP43	Q70EL4	1123 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	C10orf67	Q8IYJ2	551 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	OR8J1	Q8NGP2	316 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	OR51E1	Q8TCB6	317 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	ZFAND2B	Q8WV99	257 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	OR5P3	Q8WZ94	311 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	RNF170	Q96K19	258 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	TBX5	Q99593	518 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	APOL4	Q9BPW4	351 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	GPR84	Q9NQS5	396 aa		13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	NUFIP1	Q9UHK0	495 aa	Known RBP	13.16	□□□□□ -0.3
HDLBP-223	ENST00000449864	DNHD1	Q96M86	4753 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	TRIM77	I1YAP6	450 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	EI24	O14681	340 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	CDIPT	O14735	213 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	TMPRSS2	O15393	492 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	MAGEB4	O15481	346 aa	Predicted RBP	13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	APOL3	O95236	402 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	KRT8	P05787	483 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	ATP6V1B1	P15313	513 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	MUC1	P15941	1255 aa	Predicted RBP	13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	HTR1F	P30939	366 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	ATP6V1E1	P36543	226 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	GMFB	P60983	142 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	ACTG1	P63261	375 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	EGR3	Q06889	387 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	MICB	Q29980	383 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	KLF17	Q5JT82	389 aa	Predicted RBP	13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	TEX36	Q5VZQ5	186 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	ZNF841	Q6ZN19	808 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	PLEKHG7	Q6ZR37	379 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	C11orf53	Q8IXP5	236 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	OR10H4	Q8NGA5	316 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	HPSE2	Q8WWQ2	592 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	RFK	Q969G6	155 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	TLNRD1	Q9H1K6	362 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	SMURF1	Q9HCE7	757 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	HAO2	Q9NYQ3	351 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	DNAJB11	Q9UBS4	358 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	ZNF69	Q9UC07	566 aa		13.15	□□□□□ -0.3
HDLBP-223	ENST00000449864	IGHV3OR16-10	A0A075B7F0	116 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	TRAV40	A0A0B4J280	105 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	KIR2DS1	A0A191URI9	304 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	C22orf46	C9J442	243 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864		H3BNX3	289 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	MTRF1	O75570	445 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	LHB	P01229	141 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	TTR	P02766	147 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	ALPL	P05186	524 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	PPIAL4G	P0DN37	164 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	FAH	P16930	419 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	RIPPLY1	Q0D2K3	151 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	PLCXD3	Q63HM9	321 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	YIPF7	Q8N8F6	280 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	ST8SIA4	Q92187	359 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	RPL3L	Q92901	407 aa	Known RBP	13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	ITFG2	Q969R8	447 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	DACT3	Q96B18	629 aa	Predicted RBP	13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	UPRT	Q96BW1	309 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	ENPP5	Q9UJA9	477 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	PIGL	Q9Y2B2	252 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864		R4GMQ9	66 aa		13.14	□□□□□ -0.31
HDLBP-223	ENST00000449864	NKX6-3	A6NJ46	265 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	SRRM5	B3KS81	715 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	DHRS3	O75911	302 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	RPP14	O95059	124 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	OR2T7	P0C7T2	308 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	GPM6A	P51674	278 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	FGF12	P61328	243 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	WDR38	Q5JTN6	314 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	CEP78	Q5JTW2	689 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	PNLDC1	Q8NA58	520 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	SCCPDH	Q8NBX0	429 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	OR10Z1	Q8NGY1	313 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	OR2T27	Q8NH04	317 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	RASSF4	Q9H2L5	321 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	USE1	Q9NZ43	259 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	MRM2	Q9UI43	246 aa	Known RBP	13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	OR52A1	Q9UKL2	312 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	SNX5	Q9Y5X3	404 aa		13.13	□□□□□ -0.31
HDLBP-223	ENST00000449864	OR5B21	A6NL26	309 aa		13.12	□□□□□ -0.31
HDLBP-223	ENST00000449864	ZNF732	B4DXR9	585 aa		13.12	□□□□□ -0.31
HDLBP-223	ENST00000449864	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.12	□□□□□ -0.31
HDLBP-223	ENST00000449864	DVL1	O14640	695 aa		13.12	□□□□□ -0.31
HDLBP-223	ENST00000449864	SRSF10	O75494	262 aa	Known RBP	13.12	□□□□□ -0.31
HDLBP-223	ENST00000449864	IGLV3-1	P01715	115 aa		13.12	□□□□□ -0.31
HDLBP-223	ENST00000449864	IGHV4-38-2	P0DP08	117 aa		13.12	□□□□□ -0.31
HDLBP-223	ENST00000449864	CFHR2	P36980	270 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms