RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SAMD10Q9BYL1 202 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 BRWD3Q6RI45 1802 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 ANKRD20A5PA0PJZ0 165 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 MBTPS2O43462 519 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 CT45A8P0DMV1 189 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 CT45A9P0DMV2 189 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 CD37P11049 281 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 SELEP16581 610 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 P2RX3P56373 397 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 FZD5Q13467 585 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 CT45A2Q5DJT8 189 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 SFTPA2Q8IWL1 248 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 HPSE2Q8WWQ2 592 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 MRPS18AQ9NVS2 196 aaKnown RBP9.3□□□□□ -0.92
CTC1-202ENST00000449476 FRRS1LQ9P0K9 344 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 SIPA1L1O43166 1804 aa9.3□□□□□ -0.92
CTC1-202ENST00000449476 RAB27BO00194 218 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 ENSAO43768 121 aaKnown RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 SLC37A1P57057 533 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 PPP1R1AQ13522 171 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 ZXDCQ2QGD7 858 aaPredicted RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 PRAMEF5Q5TYX0 476 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 PRAMEF6Q5VXH4 476 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 OR2W3Q7Z3T1 314 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 NANPQ8TBE9 248 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 SARAFQ96BY9 339 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 AP1S3Q96PC3 154 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 FUT3P21217 361 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 EPHA8P29322 1005 aaPredicted RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 PTGFRP43088 359 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 PLA1AQ53H76 456 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 ZNF770Q6IQ21 691 aaPredicted RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 ZBTB44Q8NCP5 570 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 H1FXQ92522 213 aaKnown RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 RIMS4Q9H426 269 aaPredicted RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 MYOFQ9NZM1 2061 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 HAGHQ16775 308 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 SP6Q3SY56 376 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 TRIB1Q96RU8 372 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 ZPBPQ9BS86 351 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 CNTD2Q9H8S5 307 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 P4HTMQ9NXG6 502 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 OR4C45A6NMZ5 311 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 UMAD1C9J7I0 102 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 DHRS3O75911 302 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 MT-ND4LP03901 98 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 ACSM4P0C7M7 580 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 RAB35Q15286 201 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 ISXQ2M1V0 245 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 LCN15Q6UWW0 184 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 NHLRC1Q6VVB1 395 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 SPICQ8N5J4 248 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 ZNF321PQ8N8H1 164 aa9.29□□□□□ -0.92
CTC1-202ENST00000449476 APOBEC3DQ96AK3 386 aaPredicted RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 TRMT61AQ96FX7 289 aaKnown RBP9.29□□□□□ -0.92
CTC1-202ENST00000449476 H3BMH7 237 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 DCTN6O00399 190 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 GP1BAP07359 652 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 GLRA1P23415 457 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 FPR2P25090 351 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 RAB1AP62820 205 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 TRA2AQ13595 282 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTC1-202ENST00000449476 PDCD1Q15116 288 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 ZNF626Q68DY1 528 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 RPUSD3Q6P087 351 aaKnown RBP9.28□□□□□ -0.92
CTC1-202ENST00000449476 ZNF687Q8N1G0 1237 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 NUBPLQ8TB37 319 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 ZNF230Q9UIE0 474 aaPredicted RBP9.28□□□□□ -0.92
CTC1-202ENST00000449476 STRAPQ9Y3F4 350 aaKnown RBP9.28□□□□□ -0.92
CTC1-202ENST00000449476 PARP14Q460N5 1801 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 TSTD3H0UI37 97 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 HLA-HP01893 362 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 ERGP11308 486 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 FABP6P51161 128 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 TFF2Q03403 129 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 HLXQ14774 488 aaPredicted RBP9.28□□□□□ -0.92
CTC1-202ENST00000449476 LRRTM1Q86UE6 522 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 CDC20BQ86Y33 519 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 EXTL1Q92935 676 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 KCNK15Q9H427 330 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 DTX4Q9Y2E6 619 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 MDFIC2A0A1B0GVS7 189 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 A0A1W2PQD3 144 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 SLC22A20A6NK97 555 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 FOXS1O43638 330 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 CRYAAP02489 173 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 NDUFA6P56556 154 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 SKP2Q13309 424 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 SSX2Q16385 188 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 TMEM88Q6PEY1 159 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 VASH2Q86V25 355 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 DAZAP1Q96EP5 407 aaKnown RBP9.28□□□□□ -0.92
CTC1-202ENST00000449476 CHST6Q9GZX3 395 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 KCNIP2Q9NS61 270 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 GNG13Q9P2W3 67 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 MTCH2Q9Y6C9 303 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 TRIOBPQ9H2D6 2365 aa9.28□□□□□ -0.92
CTC1-202ENST00000449476 PMS2P1A4D2B8 440 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms