RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 KLHL36Q8N4N3 616 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 Q8TCH9 128 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 FBLIM1Q8WUP2 373 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 GGHQ92820 318 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 RAB39BQ96DA2 213 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 RNF170Q96K19 258 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 ISG20L2Q9H9L3 353 aaKnown RBP11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 C1orf123Q9NWV4 160 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 UBAP1Q9NZ09 502 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 CNOT2Q9NZN8 540 aaKnown RBP11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 PCDHB10Q9UN67 800 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 DIMT1Q9UNQ2 313 aaKnown RBP11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 V9GYS6 101 aa11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 CHD3Q12873 2000 aaKnown RBP11.82□□□□□ -0.52
GTF3C3-206ENST00000448539 A0A1B0GTI1 187 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 TMEM210A6NLX4 147 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 DHRS7CA6NNS2 312 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 H3BSH0 61 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 WNT9BO14905 357 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 XPNPEP2O43895 674 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 NRASP01111 189 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 RPSAP08865 295 aaKnown RBP11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 CCDC159P0C7I6 412 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 IGHV4-31P0DP07 118 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 PIPP12273 146 aaPredicted RBP11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 CCL1P22362 96 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 KIR3DL2P43630 455 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 ETV1P50549 477 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 CCR9P51686 369 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 ST3GAL4Q11206 333 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 ALKBH1Q13686 389 aaKnown RBP11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 CEACAM21Q3KPI0 293 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 CEP78Q5JTW2 689 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 CLVS2Q5SYC1 327 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 PLCXD3Q63HM9 321 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 MUC20Q8N307 709 aaPredicted RBP11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 SPICQ8N5J4 248 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF676Q8N7Q3 588 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 OR1M1Q8NGA1 313 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 OR14K1Q8NGZ2 314 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 ITPKCQ96DU7 683 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 PPP1R3EQ9H7J1 279 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF665Q9H7R5 613 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 PLCXD1Q9NUJ7 323 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 SCN3BQ9NY72 215 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 FRRS1LQ9P0K9 344 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 RNF7Q9UBF6 113 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 PSORS1C1Q9UIG5 152 aa11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 CAB39Q9Y376 341 aaPredicted RBP11.81□□□□□ -0.52
GTF3C3-206ENST00000448539 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 LOC107986453A0A1B0GWG9 222 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 SERPINA3P01011 423 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 IGHV2-70P01814 119 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 LIMS3P0CW19 117 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 LIMS4P0CW20 117 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 PPIAL4FP0DN26 164 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 MYF6P23409 242 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 IL2RGP31785 369 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 MDH2P40926 338 aaKnown RBP11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 PMELP40967 661 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 GPM6AP51674 278 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 GNG3P63215 75 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF154Q13106 437 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 HNRNPA0Q13151 305 aaKnown RBP11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 TMEM155Q4W5P6 130 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 C6orf141Q5SZD1 244 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 AHSA2Q719I0 299 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 KRT74Q7RTS7 529 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 LRRC28Q86X40 367 aaPredicted RBP11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 RDH10Q8IZV5 341 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 BOLLQ8N9W6 283 aaKnown RBP11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 LINC01356Q8N9X3 169 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF649Q9BS31 505 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 ANKRD60Q9BZ19 345 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 COMMD4Q9H0A8 199 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 PPIAL4AQ9Y536 164 aa11.8□□□□□ -0.52
GTF3C3-206ENST00000448539 DYSFO75923 2080 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 OR5B21A6NL26 309 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 B4DSR2 109 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF732B4DXR9 585 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 MYL12BO14950 172 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 RRP9O43818 475 aaKnown RBP11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF205O95201 554 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 TGFAP01135 160 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 ISG15P05161 165 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF16P17020 682 aaPredicted RBP11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 ZNF20P17024 532 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 RBMXP38159 391 aaKnown RBP11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 TGM4P49221 684 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 NANOS3P60323 173 aaKnown RBP11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 ZMYND11Q15326 602 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 KCNJ8Q15842 424 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 OR2G6Q5TZ20 316 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 LAIR2Q6ISS4 152 aa11.79□□□□□ -0.52
GTF3C3-206ENST00000448539 FAM166AQ6J272 317 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms