RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TBCEQ15813 527 aaPredicted RBP11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 NEDD8Q15843 81 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 ODF4Q2M2E3 257 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 WDR38Q5JTN6 314 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 SPATA46Q5T0L3 261 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 RNLSQ5VYX0 342 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 MBNL2Q5VZF2 373 aaKnown RBP11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 DEGS2Q6QHC5 323 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 TMPRSS11AQ6ZMR5 421 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 OR8B12Q8NGG6 310 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 ABHD4Q8TB40 342 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 CCL17Q92583 94 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 MARS2Q96GW9 593 aaKnown RBP11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 DIRC2Q96SL1 478 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 MND1Q9BWT6 205 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 PTTG3PQ9NZH4 202 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 ATPIF1Q9UII2 106 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 ZDHHC8Q9ULC8 765 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 R4GMQ9 66 aa11.61□□□□□ -0.55
PDLIM2-213ENST00000448520 PPIAL4EA0A075B759 164 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 PPIAL4CA0A0B4J2A2 164 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 PPIAL4DF5H284 164 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 SPRY3O43610 288 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 INMTO95050 263 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 HSMCR30P0CW71 290 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 PPIAL4FP0DN26 164 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 MMP15P51511 669 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 GBX2P52951 348 aaPredicted RBP11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 SPHARQ15513 63 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 GFOD2Q3B7J2 385 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 ZNF829Q3KNS6 432 aaPredicted RBP11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 GLYATL3Q5SZD4 288 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 ARL9Q6T311 187 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 DRAM2Q6UX65 266 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 KCTD8Q6ZWB6 473 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 RHOUQ7L0Q8 258 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 CATSPERDQ86XM0 798 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 SVOPQ8N4V2 548 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 OR2G2Q8NGZ5 317 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 OR2AE1Q8NHA4 323 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 KLF14Q8TD94 323 aaPredicted RBP11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 MRPL48Q96GC5 212 aaKnown RBP11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 PGAM5Q96HS1 289 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 GAL3ST1Q99999 423 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 PBOV1Q9GZY1 135 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 C7orf69Q9H7B7 122 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 NIPAL2Q9H841 368 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 FRRS1LQ9P0K9 344 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 OR52A1Q9UKL2 312 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 STARD10Q9Y365 291 aa11.6□□□□□ -0.55
PDLIM2-213ENST00000448520 MAGEA13PA6NCF6 341 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 ICMTO60725 284 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 MRPS14O60783 128 aaKnown RBP11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 FOXH1O75593 365 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 RGS9O75916 674 aaPredicted RBP11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 IGHV1-46P01743 117 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 TTRP02766 147 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 TUBG1P23258 451 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 PPP1CBP62140 327 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 ALKBH1Q13686 389 aaKnown RBP11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 HLXQ14774 488 aaPredicted RBP11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 ZMAT1Q5H9K5 638 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 TMEM255AQ5JRV8 349 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 BCL2L15Q5TBC7 163 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 COLCA1Q6ZS62 124 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 KCTD20Q7Z5Y7 419 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 RDH10Q8IZV5 341 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 BPIFB2Q8N4F0 458 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 SLC25A40Q8TBP6 338 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 LYZL4Q96KX0 146 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 OPALINQ96PE5 141 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 DCLRE1CQ96SD1 692 aaKnown RBP11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 C1QTNF5Q9BXJ0 243 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 TUBG2Q9NRH3 451 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 BABAM2Q9NXR7 383 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 CACNG2Q9Y698 323 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
PDLIM2-213ENST00000448520 TENM1Q9UKZ4 2725 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 A0A087WXM4 84 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 TRIM64CA6NLI5 447 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 OR4C45A6NMZ5 311 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 P2RY10O00398 339 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 CD55P08174 381 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 EGR1P18146 543 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 PSMB9P28065 219 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 DCTDP32321 178 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 MPV17P39210 176 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 MMP16P51512 607 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 CDK5R1Q15078 307 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 FDX2Q6P4F2 183 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 ZNF367Q7RTV3 350 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 OR13C5Q8NGS8 318 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 OR10AC1Q8NH08 325 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 GTF3AQ92664 365 aaKnown RBP11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 APOBEC3DQ96AK3 386 aaPredicted RBP11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 SGK3Q96BR1 496 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 PDCD1LG2Q9BQ51 273 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 OR2J1Q9GZK6 312 aa11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 NUFIP1Q9UHK0 495 aaKnown RBP11.58□□□□□ -0.56
PDLIM2-213ENST00000448520 TRBV2A0A0J9YWF9 115 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms