RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 RNF126Q9BV68 326 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 HCAR1Q9BXC0 346 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 ZNF350Q9GZX5 532 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 KLHL28Q9NXS3 571 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 TRPC4Q9UBN4 977 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 ZFYVE26Q68DK2 2539 aa11.61□□□□□ -0.55
DDX56-206ENST00000446987 A0A1W2PPE2 198 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 ZC3H12DA2A288 527 aaKnown RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 SAP18O00422 153 aaKnown RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 EREGO14944 169 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 DUS4LO95620 317 aaKnown RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 OR5AC1P0C628 307 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 DAOP14920 347 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 G0S2P27469 103 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 TACR3P29371 465 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 GPR4P46093 362 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 ZNHIT3Q15649 155 aaPredicted RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 AKR1C8PQ5T2L2 129 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 BIVMQ86UB2 503 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 PRSS58Q8IYP2 241 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 CA13Q8N1Q1 262 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 LRRC18Q8N456 261 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 ZNF433Q8N7K0 673 aaPredicted RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 ZNF283Q8N7M2 679 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 ZSCAN4Q8NAM6 433 aaPredicted RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 POC1BQ8TC44 478 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 SFXN5Q8TD22 340 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 RCC1LQ96I51 464 aaKnown RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 SLC5A7Q9GZV3 580 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 MED20Q9H944 212 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 SPACA1Q9HBV2 294 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 CRLF2Q9HC73 371 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 MKKSQ9NPJ1 570 aaPredicted RBP11.6□□□□□ -0.55
DDX56-206ENST00000446987 GAB2Q9UQC2 676 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 CLDN16Q9Y5I7 305 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 HS3ST3B1Q9Y662 390 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 IGSF10Q6WRI0 2623 aa11.6□□□□□ -0.55
DDX56-206ENST00000446987 A0A0A6YYH2 397 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 A6NJ64 397 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 UMAD1C9J7I0 102 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 ZNF432O94892 652 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 CST4P01036 141 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 PET100P0DJ07 73 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 BTN3A2P78410 334 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 FAM3AP98173 230 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SCGB2B2Q4G0G5 96 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 TP53I3Q53FA7 332 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 GDF7Q7Z4P5 450 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 C5orf24Q7Z6I8 188 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 OR2L13Q8N349 312 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 ZNF664Q8N3J9 261 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 TMEM52Q8NDY8 209 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 MOAP1Q96BY2 351 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SLC41A3Q96GZ6 507 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 ADGRG7Q96K78 797 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SNHG12Q9BXW3 62 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 VN1R1Q9GZP7 353 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SLC35B3Q9H1N7 401 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
DDX56-206ENST00000446987 DOCK10Q96BY6 2186 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 CDC14CA4D256 554 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 CPSF4LA6NMK7 179 aaKnown RBP11.59□□□□□ -0.55
DDX56-206ENST00000446987 MASP2O00187 686 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 CDC42EP2O14613 210 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 CDC40O60508 579 aaKnown RBP eCLIP11.59□□□□□ -0.55
DDX56-206ENST00000446987 CYTIPO60759 359 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 ARG1P05089 322 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SNRPCP09234 159 aaKnown RBP11.59□□□□□ -0.55
DDX56-206ENST00000446987 EPHA1P21709 976 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 BSGP35613 385 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 AQP2P41181 271 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 FOLR3P41439 243 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 GUK1Q16774 197 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 Q499Y3 187 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 TMEM35AQ53FP2 167 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 ZNF529Q6P280 563 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 MED25Q71SY5 747 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SLC35D2Q76EJ3 337 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 PBDC1Q9BVG4 233 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 GAL3ST2Q9H3Q3 398 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 RIMS4Q9H426 269 aaPredicted RBP11.59□□□□□ -0.55
DDX56-206ENST00000446987 TAF9BQ9HBM6 251 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 ZNF223Q9UK11 482 aaPredicted RBP11.59□□□□□ -0.55
DDX56-206ENST00000446987 PITPNC1Q9UKF7 332 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 NXT1Q9UKK6 140 aaKnown RBP11.59□□□□□ -0.55
DDX56-206ENST00000446987 V9GYS6 101 aa11.59□□□□□ -0.55
DDX56-206ENST00000446987 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
DDX56-206ENST00000446987 TRBV5-5A0A0J9YX44 114 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 TMEM238LA0A1B0GVL6 79 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 TGFBR3LH3BV60 316 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 DCTN6O00399 190 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 DOK2O60496 412 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 MRPL3P09001 348 aaKnown RBP11.58□□□□□ -0.56
DDX56-206ENST00000446987 HIST1H1TP22492 207 aaPredicted RBP11.58□□□□□ -0.56
DDX56-206ENST00000446987 CLDN12P56749 244 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 FXYD6P3P58550 94 aa11.58□□□□□ -0.56
DDX56-206ENST00000446987 TAS2R31P59538 309 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms