RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PLPP7Q8NBV4 271 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 ZNF555Q8NEP9 628 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 SEMA6DQ8NFY4 1073 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 LRRC29Q8WV35 223 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 CYGBQ8WWM9 190 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 OR5P3Q8WZ94 311 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 RPL3LQ92901 407 aaKnown RBP12.41□□□□□ -0.42
HDAC4-204ENST00000446876 FAHD2AQ96GK7 314 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 MICU1Q9BPX6 476 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 RTL8AQ9BWD3 113 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 PIGLQ9Y2B2 252 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 MPC1Q9Y5U8 109 aa12.41□□□□□ -0.42
HDAC4-204ENST00000446876 IGHV3OR15-7A0A075B7D8 119 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 DAPL1A0PJW8 107 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 A6NIN4 97 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 MPZL2O60487 215 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 DHRS3O75911 302 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 AVPP01185 164 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 WNT2P09544 360 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 ISL1P61371 349 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 ELF3P78545 371 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-204ENST00000446876 RIPPLY1Q0D2K3 151 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 SNCBQ16143 134 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 SMN1Q16637 294 aaKnown RBP12.4□□□□□ -0.42
HDAC4-204ENST00000446876 KRTAP21-3Q3LHN1 58 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 WDR38Q5JTN6 314 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 WDR82Q6UXN9 313 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 C1orf229Q6ZS94 237 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-204ENST00000446876 FAM220AQ7Z4H9 259 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 THAP5Q7Z6K1 395 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 PRSS35Q8N3Z0 413 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-204ENST00000446876 RNF170Q96K19 258 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 RDH12Q96NR8 316 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 MMP26Q9NRE1 261 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 NKX1-2Q9UD57 310 aaPredicted RBP12.4□□□□□ -0.42
HDAC4-204ENST00000446876 EXOGQ9Y2C4 368 aaKnown RBP12.4□□□□□ -0.42
HDAC4-204ENST00000446876 MYRFQ9Y2G1 1151 aa12.4□□□□□ -0.42
HDAC4-204ENST00000446876 LOC105371242A0A075B767 164 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 A0A0G2JMP0 313 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 A0A0X1KG70 313 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 TRAPPC2LH3BP13 241 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 LGALS8O00214 317 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 CDIPTO14735 213 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 WBP4O75554 376 aaKnown RBP12.39□□□□□ -0.43
HDAC4-204ENST00000446876 FOXH1O75593 365 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 SULT1C4O75897 302 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 PCMT1P22061 227 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 SRP14P37108 136 aaKnown RBP12.39□□□□□ -0.43
HDAC4-204ENST00000446876 KIR3DL2P43630 455 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 GPM6AP51674 278 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 OR12D2P58182 307 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 GMFBP60983 142 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 ACTC1P68032 377 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 ACTA1P68133 377 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 CDONQ4KMG0 1287 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 ESCO2Q56NI9 601 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 OGFRL1Q5TC84 451 aaPredicted RBP12.39□□□□□ -0.43
HDAC4-204ENST00000446876 ZNF691Q5VV52 312 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 DCAF12L2Q5VW00 463 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 PLCXD3Q63HM9 321 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 MOB3CQ70IA8 216 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 OR4M2Q8NGB6 313 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 OR14K1Q8NGZ2 314 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 SEH1LQ96EE3 360 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 Q96MT0 163 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 TMPRSS13Q9BYE2 586 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 TLNRD1Q9H1K6 362 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 GPR173Q9NS66 373 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 CTSZQ9UBR2 303 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 ENPP5Q9UJA9 477 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 V9GYS6 101 aa12.39□□□□□ -0.43
HDAC4-204ENST00000446876 OOEPA6NGQ2 149 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 SNTNA6NMZ2 147 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 A8MXK9 166 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 ZNF732B4DXR9 585 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 CASQ2O14958 399 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-204ENST00000446876 LHBP01229 141 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 GYPAP02724 150 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 ATP6V1B1P15313 513 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 ADRA2CP18825 462 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 PITPNBP48739 271 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 DCDC5Q6ZRR9 648 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 LHFPL3Q86UP9 236 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 FAM90A1Q86YD7 464 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 RDH10Q8IZV5 341 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 ACBD7Q8N6N7 88 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 PACRGLQ8N7B6 248 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 SCCPDHQ8NBX0 429 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 OR8B3Q8NGG8 313 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 NEIL1Q96FI4 390 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-204ENST00000446876 C4orf36Q96KX1 117 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 OR8B2Q96RD0 313 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 SSBP3Q9BWW4 388 aaPredicted RBP12.38□□□□□ -0.43
HDAC4-204ENST00000446876 ABCB9Q9NP78 766 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 MIOXQ9UGB7 285 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 LRCH1Q9Y2L9 728 aa12.38□□□□□ -0.43
HDAC4-204ENST00000446876 A0A1B0GVI7 797 aa12.37□□□□□ -0.43
HDAC4-204ENST00000446876 LOC107986453A0A1B0GWG9 222 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms