RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 M1APQ8TC57 530 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 SIT1Q9Y3P8 196 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
SHANK3-203ENST00000445220 FAM166BA8MTA8 275 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 PLA2G10O15496 165 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 CSN1S1P47710 185 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 PTP4A1Q93096 173 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 FBXL17Q9UF56 701 aa16.77■□□□□ 0.28
SHANK3-203ENST00000445220 ING1Q9UK53 422 aaPredicted RBP16.77■□□□□ 0.28
SHANK3-203ENST00000445220 SERTM2A0A1B0GWG4 89 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 FGF17O60258 216 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 CD22P20273 847 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 Q7L0L9 218 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 SLC37A2Q8TED4 501 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 SLC2A9Q9NRM0 540 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 MMP17Q9ULZ9 603 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 VAMP5O95183 116 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 MYOGP15173 224 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 ABLIM2Q6H8Q1 611 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 Q6ZN92 141 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 CDC20BQ86Y33 519 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 OR8B4Q96RC9 309 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 CACFD1Q9UGQ2 172 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 CNTRLQ7Z7A1 2325 aa16.77■□□□□ 0.27
SHANK3-203ENST00000445220 TEX50A0A1B0GTY4 177 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 MASP2O00187 686 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 CTAG2O75638 210 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 NRASP01111 189 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 IGFBP6P24592 240 aaPredicted RBP16.76■□□□□ 0.27
SHANK3-203ENST00000445220 BATF2Q8N1L9 274 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 TP53I13Q8NBR0 393 aaPredicted RBP16.76■□□□□ 0.27
SHANK3-203ENST00000445220 Q9N2K0 584 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 K7ESM1 405 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 WNT11O96014 354 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 TUSC1Q2TAM9 212 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 CD300LDQ6UXZ3 194 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 RTL8AQ9BWD3 113 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 NMES1Q9C002 83 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 B9D1Q9UPM9 204 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 A0A1B0GX78 115 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 PGA3P0DJD8 388 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 SDHBP21912 280 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 EDDM3AQ14507 147 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 PARM1Q6UWI2 310 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 SLC26A10Q8NG04 563 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 WBP2Q969T9 261 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 ERGIC1Q969X5 290 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 OR6C1Q96RD1 312 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 C1QTNF6Q9BXI9 259 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 NRSN2Q9GZP1 204 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 MIXL1Q9H2W2 232 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 OPN4Q9UHM6 478 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 CNN1P51911 297 aaKnown RBP16.76■□□□□ 0.27
SHANK3-203ENST00000445220 C9orf50Q5SZB4 431 aa16.76■□□□□ 0.27
SHANK3-203ENST00000445220 CISD2Q8N5K1 135 aaKnown RBP16.76■□□□□ 0.27
SHANK3-203ENST00000445220 UBE2L5PA0A1B0GUS4 154 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 INHBBP09529 407 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 PPIAP62937 165 aaKnown RBP16.75■□□□□ 0.27
SHANK3-203ENST00000445220 ELAVL1Q15717 326 aaKnown RBP16.75■□□□□ 0.27
SHANK3-203ENST00000445220 TMEM9BQ9NQ34 198 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 DHCR7Q9UBM7 475 aaKnown RBP16.75■□□□□ 0.27
SHANK3-203ENST00000445220 DUXBA0A1W2PPF3 345 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 RBFOX3A6NFN3 312 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 ZNF468Q5VIY5 522 aaPredicted RBP16.75■□□□□ 0.27
SHANK3-203ENST00000445220 SDK1Q7Z5N4 2213 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 PRRT4C9JH25 899 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 OR2B11Q5JQS5 317 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 FAHD2BQ6P2I3 314 aaPredicted RBP16.75■□□□□ 0.27
SHANK3-203ENST00000445220 TMPRSS11FQ6ZWK6 438 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 RDH5Q92781 318 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 FAHD2AQ96GK7 314 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 CHST6Q9GZX3 395 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 ADH4P08319 380 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 CHRNB4P30926 498 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 BTG2P78543 158 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 IFITM3Q01628 133 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 ZNF273Q14593 569 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 OTOSQ8NHW6 89 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 HMGCLL1Q8TB92 370 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 POLDIP2Q9Y2S7 368 aa16.75■□□□□ 0.27
SHANK3-203ENST00000445220 TMEM272A0A1B0GTI8 110 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 MAP1LC3B2A6NCE7 125 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 CDRT15L2A8MXV6 281 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 ARPC3O15145 178 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 IL3RAP26951 378 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 SULT1A1P50225 295 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 SLC37A1P57057 533 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 BPIFB3P59826 476 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 PRR27Q6MZM9 219 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 MAP1LC3BQ9GZQ8 125 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 KIAA1324LA8MWY0 1029 aaPredicted RBP16.74■□□□□ 0.27
SHANK3-203ENST00000445220 FCN1O00602 326 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 IL13RA2Q14627 380 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 FA2HQ7L5A8 372 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 OVCH2Q7RTZ1 564 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 BHLHE23Q8NDY6 225 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 LINC00615Q96LM1 132 aaPredicted RBP16.74■□□□□ 0.27
SHANK3-203ENST00000445220 ZFPL1O95159 310 aa16.74■□□□□ 0.27
SHANK3-203ENST00000445220 ACAA1P09110 424 aaPredicted RBP16.74■□□□□ 0.27
SHANK3-203ENST00000445220 ADGRG7Q96K78 797 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms