RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PQLC2LA1A4F0 135 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 RAMP1O60894 148 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 ECH1Q13011 328 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 KISS1Q15726 138 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 Q7L0L9 218 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 SSC4DQ8WTU2 575 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 TMED6Q8WW62 240 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 RTBDNQ9BSG5 229 aaPredicted RBP14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 CRB3Q9BUF7 120 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 TMEM100Q9NV29 134 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 GHRLQ9UBU3 117 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 HDGFL3Q9Y3E1 203 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 H2AFB1P0C5Y9 115 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 SNU13P55769 128 aaKnown RBP14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 TAS2R46P59540 309 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 SUPT4H1P63272 117 aaKnown RBP14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 CSNK2A1P68400 391 aaPredicted RBP14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 DMRTC1Q5HYR2 192 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 LHFPL1Q86WI0 220 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 FAM89BQ8N5H3 189 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 CSNK2A3Q8NEV1 391 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 OR5D18Q8NGL1 313 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 PGAM5Q96HS1 289 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 PHF7Q9BWX1 381 aaPredicted RBP14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 CYTL1Q9NRR1 136 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 MRPS17Q9Y2R5 130 aaKnown RBP14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 B3GALT1Q9Y5Z6 326 aa14.53□□□□□ -0.08
SEMA3B-207ENST00000441915 AQP7P3A6NL99 342 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 LINC00587B1AMM8 73 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 HTR3BO95264 441 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 CD79AP11912 226 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 FKBP2P26885 142 aaKnown RBP14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 EIF1P41567 113 aaKnown RBP14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 PTGFRP43088 359 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 AADACL3Q5VUY0 350 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 OR13G1Q8NGZ3 307 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 DNASE2BQ8WZ79 361 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 SPACA9Q96E40 222 aaPredicted RBP14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 PRR13Q9NZ81 148 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 RARRES3Q9UL19 164 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 MED12Q93074 2177 aa14.52□□□□□ -0.08
SEMA3B-207ENST00000441915 NUDT19A8MXV4 375 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 GPR31O00270 319 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 SDCBPO00560 298 aaPredicted RBP14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 MBTPS2O43462 519 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 ACTL6AO96019 429 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 PET100P0DJ07 73 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 NR2C1P13056 603 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 ADH6P28332 368 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 ANKRD55Q3KP44 614 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 ZNF585AQ6P3V2 769 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 CYYR1Q96J86 154 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 MICU1Q9BPX6 476 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 EHFQ9NZC4 300 aa14.52□□□□□ -0.09
SEMA3B-207ENST00000441915 PRF1P14222 555 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 BLVRBP30043 206 aaPredicted RBP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 CLDN17P56750 224 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 ZNF239Q16600 458 aaKnown RBP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 PLEKHN1Q494U1 663 aaPredicted RBP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 PUSL1Q8N0Z8 303 aaKnown RBP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 WDSUB1Q8N9V3 476 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 NPRL2Q8WTW4 380 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 RASL10BQ96S79 203 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 S100A13Q99584 98 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 SPSB2Q99619 263 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 DEFB126Q9BYW3 111 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 ZNF160Q9HCG1 818 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 OR5AC2Q9NZP5 309 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 ZNF629Q9UEG4 869 aaPredicted RBP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 C19orf25Q9UFG5 118 aaPredicted RBP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 OSGIN2Q9Y236 505 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 LOC102725191A0A1B0GVB3 256 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 MSGN1A6NI15 193 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 STMND1H3BQB6 276 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 LYL1P12980 280 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 SLC6A9P48067 706 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 LSM6P62312 80 aaKnown RBP14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 SLC35A1P78382 337 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 C2orf50Q96LR7 162 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 WDR87Q6ZQQ6 2873 aa14.51□□□□□ -0.09
SEMA3B-207ENST00000441915 E9PLN8 166 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 F5H5K5 113 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 IGFBP4P22692 258 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 GLRA1P23415 457 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 CTSSP25774 331 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 ALDH3B1P43353 468 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 RAB13P51153 203 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 BLOC1S1P78537 153 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 EIF3IQ13347 325 aaKnown RBP14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 C1QL2Q7Z5L3 287 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 GJC3Q8NFK1 279 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 OR10C1Q96KK4 312 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 AQP10Q96PS8 301 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 NCOA6Q14686 2063 aaPredicted RBP14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 SERPINE3A8MV23 424 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 ADCYAP1P18509 176 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 KLK2P20151 261 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 SERPINA2P20848 420 aa14.5□□□□□ -0.09
SEMA3B-207ENST00000441915 PRAMEF20Q5VT98 475 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms