RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 NDNFQ8TB73 568 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 RPL3LQ92901 407 aaKnown RBP6.96□□□□□ -1.3
GABRE-203ENST00000441219 TAMM41Q96BW9 452 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 RNFT2Q96EX2 444 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 NOL4LQ96MY1 436 aaPredicted RBP6.96□□□□□ -1.3
GABRE-203ENST00000441219 SLC25A33Q9BSK2 321 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 PPP1R3EQ9H7J1 279 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 LIN7BQ9HAP6 207 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 SDR39U1Q9NRG7 319 aaPredicted RBP6.96□□□□□ -1.3
GABRE-203ENST00000441219 VAPAQ9P0L0 249 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 LRP12Q9Y561 859 aa6.96□□□□□ -1.3
GABRE-203ENST00000441219 SORL1Q92673 2214 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 IGKV1D-17A0A075B6S4 117 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 MEX3AA1L020 520 aaKnown RBP6.95□□□□□ -1.3
GABRE-203ENST00000441219 TRIM64CA6NLI5 447 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 EFCAB9A8MZ26 197 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 EVPLLA8MZ36 301 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 AHCYL1O43865 530 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 TYROBPO43914 113 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 TIPRLO75663 272 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 AMY1AP04745 511 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 AMY2AP04746 511 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 CD14P08571 375 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 SLC2A1P11166 492 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 PIPP12273 146 aaPredicted RBP6.95□□□□□ -1.3
GABRE-203ENST00000441219 CYP51A1Q16850 503 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 LRIF1Q5T3J3 769 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 FAM27D1Q5T7N8 215 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 ZNF770Q6IQ21 691 aaPredicted RBP6.95□□□□□ -1.3
GABRE-203ENST00000441219 LCNL1Q6ZST4 164 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 TMPRSS11FQ6ZWK6 438 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 IFT20Q8IY31 132 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 KIRREL3Q8IZU9 778 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 OR6V1Q8N148 313 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 C17orf53Q8N3J3 647 aaPredicted RBP6.95□□□□□ -1.3
GABRE-203ENST00000441219 SLC26A7Q8TE54 656 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 SPTSSAQ969W0 71 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 TSSK2Q96PF2 358 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 TLNRD1Q9H1K6 362 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 YY1AP1Q9H869 796 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 LINC00527Q9UJ94 153 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 HAO1Q9UJM8 370 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 SH3GLB1Q9Y371 365 aa6.95□□□□□ -1.3
GABRE-203ENST00000441219 HERC1Q15751 4861 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 DCTN6O00399 190 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 OR2F2O95006 317 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 PSG2P11465 335 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 GPX2P18283 190 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 WHAMMP3Q1A5X7 153 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 PAGE3Q5JUK9 113 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 PGM2L1Q6PCE3 622 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 FAM122BQ7Z309 247 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 PATL1Q86TB9 770 aaKnown RBP6.94□□□□□ -1.3
GABRE-203ENST00000441219 EGFL6Q8IUX8 553 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 NRMQ8IXM6 262 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 OR11H6Q8NGC7 330 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 OR10Z1Q8NGY1 313 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 OR2AJ1Q8NGZ0 328 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 OR2T27Q8NH04 317 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 OR8U1Q8NH10 309 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 MICU1Q9BPX6 476 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 PAPOLGQ9BWT3 736 aaKnown RBP6.94□□□□□ -1.3
GABRE-203ENST00000441219 C1orf21Q9H246 121 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 NMNAT1Q9HAN9 279 aaPredicted RBP6.94□□□□□ -1.3
GABRE-203ENST00000441219 PNRC2Q9NPJ4 139 aaKnown RBP6.94□□□□□ -1.3
GABRE-203ENST00000441219 ZNF222Q9UK12 451 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 CORO2BQ9UQ03 480 aa6.94□□□□□ -1.3
GABRE-203ENST00000441219 TRBV5-3A0A0A0MS03 114 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 TRPC5OSA6NMA1 111 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 SOCS2O14508 198 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 UBDO15205 165 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 IGHV1-8P0DP01 117 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 KITP10721 976 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 SPNP16150 400 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 GLRA1P23415 457 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 SLC7A2P52569 658 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 STX3Q13277 289 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 SRSF7Q16629 238 aaKnown RBP eCLIP6.93□□□□□ -1.36e-8■■■□□ 17.8
GABRE-203ENST00000441219 MINOS1Q5TGZ0 78 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 AGBL2Q5U5Z8 902 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 PTCHD4Q6ZW05 846 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 KCTD8Q6ZWB6 473 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 CYB561A3Q8NBI2 242 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 CHPT1Q8WUD6 406 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 STMN2Q93045 179 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 SDSLQ96GA7 329 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 RBM14Q96PK6 669 aaKnown RBP6.93□□□□□ -1.3
GABRE-203ENST00000441219 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 SP140LQ9H930 580 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 TBC1D23Q9NUY8 699 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 MINOS1-NBL1R4GNA1 71 aa6.93□□□□□ -1.3
GABRE-203ENST00000441219 ANXA2P2A6NMY6 339 aa6.92□□□□□ -1.3
GABRE-203ENST00000441219 SERPINE3A8MV23 424 aa6.92□□□□□ -1.3
GABRE-203ENST00000441219 C17orf98A8MV24 154 aa6.92□□□□□ -1.3
GABRE-203ENST00000441219 CDC42EP2O14613 210 aa6.92□□□□□ -1.3
GABRE-203ENST00000441219 SLC22A2O15244 555 aa6.92□□□□□ -1.3
GABRE-203ENST00000441219 IFNA6P05013 189 aa6.92□□□□□ -1.3
GABRE-203ENST00000441219 RPLP1P05386 114 aaKnown RBP6.92□□□□□ -1.3
GABRE-203ENST00000441219 DDOSTP39656 456 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms