RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 C19orf18Q8NEA5 215 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 CCDC54Q8NEL0 328 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ERGIC1Q969X5 290 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 RAB39BQ96DA2 213 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 PELI1Q96FA3 418 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 MICU1Q9BPX6 476 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 RTL8AQ9BWD3 113 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ISG20L2Q9H9L3 353 aaKnown RBP15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ABCB9Q9NP78 766 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 MRPS18AQ9NVS2 196 aaKnown RBP15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ERVK13-1Q9NX77 482 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 PIGLQ9Y2B2 252 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 V9GYS6 101 aa15.15■□□□□ 0.02
CPSF4-205ENST00000440514 ANK3Q12955 4377 aaKnown RBP15.15■□□□□ 0.02
CPSF4-205ENST00000440514 SONP18583 2426 aaKnown RBP15.15■□□□□ 0.02
CPSF4-205ENST00000440514 LOC107986453A0A1B0GWG9 222 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 MTRF1O75570 445 aaKnown RBP15.14■□□□□ 0.01
CPSF4-205ENST00000440514 CCL1P22362 96 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 MDH2P40926 338 aaKnown RBP15.14■□□□□ 0.01
CPSF4-205ENST00000440514 NANOS3P60323 173 aaKnown RBP15.14■□□□□ 0.01
CPSF4-205ENST00000440514 RIPPLY1Q0D2K3 151 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 ZNF154Q13106 437 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 GALEQ14376 348 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 TMEM155Q4W5P6 130 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 CEP78Q5JTW2 689 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 LRRC28Q86X40 367 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-205ENST00000440514 C1orf87Q8N0U7 546 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 PLPP7Q8NBV4 271 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 OR1M1Q8NGA1 313 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 OR14K1Q8NGZ2 314 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 OR5P3Q8WZ94 311 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 ZNF649Q9BS31 505 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 RNF7Q9UBF6 113 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 ENPP5Q9UJA9 477 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 KCNS2Q9ULS6 477 aa15.14■□□□□ 0.01
CPSF4-205ENST00000440514 A0A1B0GVI7 797 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 hCG_1807616A0A1W2PRN6 198 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 B4DSR2 109 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 RRP9O43818 475 aaKnown RBP15.13■□□□□ 0.01
CPSF4-205ENST00000440514 LMX1BO60663 402 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 HTR1AP08908 422 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 HOXB4P17483 251 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-205ENST00000440514 PLCXD3Q63HM9 321 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 LAIR2Q6ISS4 152 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 KCTD8Q6ZWB6 473 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 DOK3Q7L591 496 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 SPICQ8N5J4 248 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 OR2G2Q8NGZ5 317 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 TFAP2CQ92754 450 aa15.13■□□□□ 0.01
CPSF4-205ENST00000440514 METTL17Q9H7H0 456 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-205ENST00000440514 FGF20Q9NP95 211 aaPredicted RBP15.13■□□□□ 0.01
CPSF4-205ENST00000440514 PPIAL4EA0A075B759 164 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 A6NIN4 97 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 CEACAM18A8MTB9 384 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 PPIAL4DF5H284 164 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 SYT7O43581 403 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 ATP6V1G2O95670 118 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 MSMBP08118 114 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 UBCP0CG48 685 aaKnown RBP15.12■□□□□ 0.01
CPSF4-205ENST00000440514 LIMS3P0CW19 117 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 LIMS4P0CW20 117 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 PPIAL4FP0DN26 164 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 ZNF12P17014 697 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 EGR1P18146 543 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 DCKP27707 260 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 SEC61A1P61619 476 aaKnown RBP15.12■□□□□ 0.01
CPSF4-205ENST00000440514 ZBTB37Q5TC79 503 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 Q6ZSR3 168 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 MOB3CQ70IA8 216 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 KRT74Q7RTS7 529 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 C11orf53Q8IXP5 236 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 RDH10Q8IZV5 341 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 SYS1Q8N2H4 156 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 MUC20Q8N307 709 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-205ENST00000440514 KLHL36Q8N4N3 616 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 GCSAMQ8N6F7 178 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 RNF170Q96K19 258 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 TMEM246Q9BRR3 403 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 PATZ1Q9HBE1 687 aaKnown RBP15.12■□□□□ 0.01
CPSF4-205ENST00000440514 TMEM165Q9HC07 324 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 GPR173Q9NS66 373 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 CHCHD3Q9NX63 227 aaKnown RBP15.12■□□□□ 0.01
CPSF4-205ENST00000440514 FRRS1LQ9P0K9 344 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 PCDHB10Q9UN67 800 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 PPIAL4AQ9Y536 164 aa15.12■□□□□ 0.01
CPSF4-205ENST00000440514 SETD2Q9BYW2 2564 aaPredicted RBP15.12■□□□□ 0.01
CPSF4-205ENST00000440514 E9PI62 339 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 F5H0A9 414 aaPredicted RBP15.11■□□□□ 0.01
CPSF4-205ENST00000440514 C3orf80F5H4A9 247 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 ETV1P50549 477 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 GPM6AP51674 278 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 RIPPLY3P57055 190 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 ZNF404Q494X3 552 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 FDX2Q6P4F2 183 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 WDR82Q6UXN9 313 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 IL17RELQ6ZVW7 336 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 GLCCI1Q86VQ1 547 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 DEFB108BQ8NET1 73 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 OR51F2Q8NH61 342 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 FBLIM1Q8WUP2 373 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms