RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 MED21Q13503 144 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 ZMYND11Q15326 602 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 MPPED2Q15777 294 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 CEACAM21Q3KPI0 293 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 TMEM244Q5VVB8 128 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 OR2G2Q8NGZ5 317 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 RNF166Q96A37 237 aaPredicted RBP9.94□□□□□ -0.82
HSPG2-206ENST00000439717 PELI1Q96FA3 418 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 TMEM80Q96HE8 168 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 ZNF665Q9H7R5 613 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 YAE1D1Q9NRH1 226 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 PLCXD1Q9NUJ7 323 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 UFSP2Q9NUQ7 469 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 CNOT2Q9NZN8 540 aaKnown RBP9.94□□□□□ -0.82
HSPG2-206ENST00000439717 RNF7Q9UBF6 113 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 DIMT1Q9UNQ2 313 aaKnown RBP9.94□□□□□ -0.82
HSPG2-206ENST00000439717 DYSFO75923 2080 aa9.94□□□□□ -0.82
HSPG2-206ENST00000439717 PPIAL4EA0A075B759 164 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 EFCAB10A6NFE3 127 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 A6NLC8 198 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 A8MV72 311 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-206ENST00000439717 PPIAL4DF5H284 164 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 SYT7O43581 403 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 CYB5R3P00387 301 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-206ENST00000439717 LIMS3P0CW19 117 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 LIMS4P0CW20 117 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 PPIAL4FP0DN26 164 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 PIPP12273 146 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-206ENST00000439717 FAHP16930 419 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 ZNF16P17020 682 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-206ENST00000439717 MYL12AP19105 171 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 KIR3DL2P43630 455 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 HSPA13P48723 471 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 ZNF154Q13106 437 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 FAM76BQ5HYJ3 339 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 CLVS2Q5SYC1 327 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 TMEM42Q69YG0 159 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 FAM166AQ6J272 317 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 TMPRSS11AQ6ZMR5 421 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 WDR86Q86TI4 376 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 KLHL36Q8N4N3 616 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 OR1M1Q8NGA1 313 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 OR5A2Q8NGI9 324 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 HPSE2Q8WWQ2 592 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 GGHQ92820 318 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 C10orf35Q96D05 121 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 RNF170Q96K19 258 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 TLNRD1Q9H1K6 362 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 PPP1R3EQ9H7J1 279 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 ISG20L2Q9H9L3 353 aaKnown RBP9.93□□□□□ -0.82
HSPG2-206ENST00000439717 TRIM36Q9NQ86 728 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 C1orf123Q9NWV4 160 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 TMEM160Q9NX00 188 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 FRRS1LQ9P0K9 344 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 CAB39Q9Y376 341 aaPredicted RBP9.93□□□□□ -0.82
HSPG2-206ENST00000439717 EXOSC1Q9Y3B2 195 aaKnown RBP9.93□□□□□ -0.82
HSPG2-206ENST00000439717 PPIAL4AQ9Y536 164 aa9.93□□□□□ -0.82
HSPG2-206ENST00000439717 YLPM1P49750 1951 aaKnown RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 OR5B21A6NL26 309 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 FAM157AC9JC47 383 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 NRASP01111 189 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 TGFAP01135 160 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 LHBP01229 141 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 THBS2P35442 1172 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 CFHR2P36980 270 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 TGM4P49221 684 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 GBX2P52951 348 aaPredicted RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 DVL1P1P54792 670 aaPredicted RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 NANOS3P60323 173 aaKnown RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 GNG3P63215 75 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 HNRNPA0Q13151 305 aaKnown RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 ALKBH1Q13686 389 aaKnown RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 KCNJ8Q15842 424 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 ODF4Q2M2E3 257 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 ZNF404Q494X3 552 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 PLCXD3Q63HM9 321 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 LAIR2Q6ISS4 152 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 KCTD8Q6ZWB6 473 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 MOB3CQ70IA8 216 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 C11orf53Q8IXP5 236 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 OR51F2Q8NH61 342 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 PLEKHA1Q9HB21 404 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 PATZ1Q9HBE1 687 aaKnown RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 TMEM165Q9HC07 324 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 CHCHD3Q9NX63 227 aaKnown RBP9.92□□□□□ -0.82
HSPG2-206ENST00000439717 UBAP1Q9NZ09 502 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 PSORS1C1Q9UIG5 152 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 KCNS2Q9ULS6 477 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 PCDHB10Q9UN67 800 aa9.92□□□□□ -0.82
HSPG2-206ENST00000439717 LOC107986453A0A1B0GWG9 222 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 hCG_1807616A0A1W2PRN6 198 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 TMEM212A6NML5 194 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 OR4C45A6NMZ5 311 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 ZNF732B4DXR9 585 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 INAFM1C9JVW0 142 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 F5H0A9 414 aaPredicted RBP9.91□□□□□ -0.82
HSPG2-206ENST00000439717 LGALS8O00214 317 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 LMX1BO60663 402 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 SERPINA3P01011 423 aa9.91□□□□□ -0.82
HSPG2-206ENST00000439717 MSMBP08118 114 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms