RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 THEM4Q5T1C6 240 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 ABHD12BQ7Z5M8 362 aaPredicted RBP13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 C17orf82Q86X59 251 aaPredicted RBP13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 DEFB119Q8N690 84 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 C15orf54Q8N8G6 183 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 OR8B12Q8NGG6 310 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 LYPD6BQ8NI32 183 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 ZDHHC12Q96GR4 267 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 C5orf34Q96MH7 638 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 SOX7Q9BT81 388 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 VN1R1Q9GZP7 353 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 SERINC1Q9NRX5 453 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 ALKBH4Q9NXW9 302 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 B3GAT1Q9P2W7 334 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 MEMO1Q9Y316 297 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 ADAMTS9Q9P2N4 1935 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 FER1L5A0AVI2 2057 aa13.46□□□□□ -0.25
CDC42EP4-202ENST00000439510 EIF3GO75821 320 aaKnown RBP eCLIP13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 CST4P01036 141 aa13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 RCC1P18754 421 aaPredicted RBP13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 GLRA1P23415 457 aa13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 F2RL1P55085 397 aa13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 SUMO3P55854 103 aaPredicted RBP13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 EMG1Q92979 244 aaKnown RBP13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 SUSD2Q9UGT4 822 aa13.46□□□□□ -0.26
CDC42EP4-202ENST00000439510 FOXI3A8MTJ6 420 aaPredicted RBP13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 C9JQL5 133 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 CRTAPO75718 401 aaPredicted RBP13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 GAPDHP04406 335 aaKnown RBP13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 NME2P22392 152 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 PTGFRP43088 359 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 ZNF84P51523 738 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 DVL1P1P54792 670 aaPredicted RBP13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 C17orf67Q0P5P2 114 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 ECH1Q13011 328 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 C21orf62-AS1Q17RA5 79 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 DHRS11Q6UWP2 260 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 GKN2Q86XP6 184 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 OR10A2Q9H208 303 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 GPR84Q9NQS5 396 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 RPH3AQ9Y2J0 694 aaPredicted RBP13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 SERPINA5P05154 406 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 ZNF708P17019 499 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 ADH6P28332 368 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 OR3A2P47893 321 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 S100A10P60903 97 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 RAB5BP61020 215 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 SPEM2Q0P670 501 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 SWI5Q1ZZU3 235 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 FAM219AQ8IW50 185 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 PRSS58Q8IYP2 241 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 SULT4A1Q9BR01 284 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 CNTNAP3Q9BZ76 1288 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 PLA2G2EQ9NZK7 142 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 ZNF319Q9P2F9 582 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 CACFD1Q9UGQ2 172 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 TIMM10BQ9Y5J6 103 aa13.45□□□□□ -0.26
CDC42EP4-202ENST00000439510 HTR3BO95264 441 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 HCKP08631 526 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 ACAA1P09110 424 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 NME1P15531 152 aaKnown RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 SNU13P55769 128 aaKnown RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 ZNF121P58317 390 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 FAM76BQ5HYJ3 339 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 COMMD2Q86X83 199 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 OR1L3Q8NH93 324 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 LMX1AQ8TE12 382 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 KIRREL1Q96J84 757 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 DUSP15Q9H1R2 295 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 GSKIPQ9P0R6 139 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 ATXN7L1Q9ULK2 861 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 C2orf72A6NCS6 295 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 ETV2O00321 342 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 SDCBPO00560 298 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 PDGFBP01127 241 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 HOXB5P09067 269 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 CD80P33681 288 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 CSNK2A1P68400 391 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 RNF4P78317 190 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 FOXF1Q12946 379 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 CSNK2A3Q8NEV1 391 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 TSTD1Q8NFU3 115 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 OR2AJ1Q8NGZ0 328 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 ST6GALNAC5Q9BVH7 336 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 EHFQ9NZC4 300 aa13.44□□□□□ -0.26
CDC42EP4-202ENST00000439510 IGKV1-9A0A0C4DH69 117 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 PGA4P0DJD7 388 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 PGA3P0DJD8 388 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 GIMD1P0DJR0 217 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 ANOS1P23352 680 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 PTAFRP25105 342 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 ALDH3B1P43353 468 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 DHPSP49366 369 aaPredicted RBP13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 HGFACQ04756 655 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 EIF3IQ13347 325 aaKnown RBP13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 LANCL3Q6ZV70 420 aa13.43□□□□□ -0.26
CDC42EP4-202ENST00000439510 CRB3Q9BUF7 120 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms