RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DGCR6LQ9BY27 220 aa8.37□□□□□ -1.07
RTN4-211ENST00000438462 RABEP2Q9H5N1 569 aa8.37□□□□□ -1.07
RTN4-211ENST00000438462 INIPQ9NRY2 104 aa8.37□□□□□ -1.07
RTN4-211ENST00000438462 ZNF222Q9UK12 451 aa8.37□□□□□ -1.07
RTN4-211ENST00000438462 IGHV4OR15-8A0A075B7B6 117 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 A0A087WW49 117 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 GGT3PA6NGU5 568 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 H3BQF6 201 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 RER1O15258 196 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 FGF16O43320 207 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 AKR7A2O43488 359 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 IFNA4P05014 189 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 FAM153BP0C7A2 387 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 GDNFP39905 211 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
RTN4-211ENST00000438462 TOP3AQ13472 1001 aaPredicted RBP8.36□□□□□ -1.07
RTN4-211ENST00000438462 KIAA0141Q14154 515 aaPredicted RBP8.36□□□□□ -1.07
RTN4-211ENST00000438462 RBMS2Q15434 407 aaKnown RBP8.36□□□□□ -1.07
RTN4-211ENST00000438462 OR1Q1Q15612 314 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 NANOGP8Q6NSW7 305 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 CAVIN1Q6NZI2 390 aaKnown RBP8.36□□□□□ -1.07
RTN4-211ENST00000438462 SMARCD3Q6STE5 483 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 ZBTB46Q86UZ6 589 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 CALHM1Q8IU99 346 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 WFDC3Q8IUB2 231 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 TMEM19Q96HH6 336 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 RBP7Q96R05 134 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 ALG12Q9BV10 488 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 DPH5Q9H2P9 285 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 CALML5Q9NZT1 146 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 TMEM216Q9P0N5 145 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 SLAMF8Q9P0V8 285 aa8.36□□□□□ -1.07
RTN4-211ENST00000438462 SLC22A2O15244 555 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 EIF3HO15372 352 aaKnown RBP eCLIP8.35□□□□□ -1.07
RTN4-211ENST00000438462 TIPRLO75663 272 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 RBP4P02753 201 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 CTLA4P16410 223 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 CLEC7AQ9BXN2 247 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 KLK15Q9H2R5 256 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 MDFICQ9P1T7 246 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 DPM3Q9P2X0 92 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 A4GNTQ9UNA3 340 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 IFT52Q9Y366 437 aa8.35□□□□□ -1.07
RTN4-211ENST00000438462 RRP9O43818 475 aaKnown RBP8.34□□□□□ -1.07
RTN4-211ENST00000438462 PEX11AO75192 247 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 PTP4A3O75365 173 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 DNAJC8O75937 253 aaPredicted RBP8.34□□□□□ -1.07
RTN4-211ENST00000438462 FAM106CPP0CH98 169 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 ZNF728P0DKX0 622 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 PSG2P11465 335 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 VDAC1P21796 283 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 SDHAP31040 664 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 BMI1P35226 326 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 AQP2P41181 271 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 TXNL4AP83876 142 aaKnown RBP8.34□□□□□ -1.07
RTN4-211ENST00000438462 TMEM139Q8IV31 216 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 POM121L12Q8N7R1 296 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 OR56B2PQ8NGI1 322 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 SDSLQ96GA7 329 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 COQ7Q99807 217 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 TLNRD1Q9H1K6 362 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 C1orf21Q9H246 121 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 EGLN3Q9H6Z9 239 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 TMEM27Q9HBJ8 222 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 CHCHD3Q9NX63 227 aaKnown RBP8.34□□□□□ -1.07
RTN4-211ENST00000438462 COMMD3-BMI1R4GMX3 469 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 MUC2Q02817 5179 aa8.34□□□□□ -1.07
RTN4-211ENST00000438462 IGLV2-18A0A075B6J9 118 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 IZUMO1RA6ND01 250 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
RTN4-211ENST00000438462 AZIN1O14977 448 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 LCATP04180 440 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 ACSM4P0C7M7 580 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 TMEM11P17152 192 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 CLNS1AP54105 237 aaKnown RBP8.33□□□□□ -1.08
RTN4-211ENST00000438462 DR1Q01658 176 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 ZNF92Q03936 586 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 KRT71Q3SY84 523 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 FGD3Q5JSP0 725 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 SWT1Q5T5J6 900 aaKnown RBP8.33□□□□□ -1.08
RTN4-211ENST00000438462 LCN12Q6JVE5 192 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 Q6ZR54 194 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 NAA40Q86UY6 237 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 LYPD1Q8N2G4 141 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 ZNF676Q8N7Q3 588 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 OR8J2Q8NGG1 315 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 OR10Z1Q8NGY1 313 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 OR2AE1Q8NHA4 323 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 FNDC8Q8TC99 324 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 SLC38A5Q8WUX1 472 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 PBKQ96KB5 322 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 PPP3R2Q96LZ3 170 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 HDHD2Q9H0R4 259 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 YY1AP1Q9H869 796 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 SNX24Q9Y343 169 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 WSB1Q9Y6I7 421 aa8.33□□□□□ -1.08
RTN4-211ENST00000438462 LRP2P98164 4655 aa8.32□□□□□ -1.08
RTN4-211ENST00000438462 PRSS51A0A1B0GVH4 220 aa8.32□□□□□ -1.08
RTN4-211ENST00000438462 H7C1C5 153 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms