RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 GPER1Q99527 375 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 SLX1AQ9BQ83 275 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 GPR173Q9NS66 373 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 H2AFB2P0C5Z0 115 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 QRFPP83859 136 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 FAM3AP98173 230 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 CD276Q5ZPR3 534 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 RPRMLQ8N4K4 120 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 FCAMRQ8WWV6 532 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 ZMAT3Q9HA38 289 aaKnown RBP18.31■□□□□ 0.52
PTPRF-207ENST00000436724 ATPIF1Q9UII2 106 aa18.31■□□□□ 0.52
PTPRF-207ENST00000436724 CRYABP02511 175 aaKnown RBP18.3■□□□□ 0.52
PTPRF-207ENST00000436724 TPOP07202 933 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 CXCL3P19876 107 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 MNDAP41218 407 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 KISS1Q15726 138 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 NSUN5P2Q63ZY6 315 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 GLIPR1L1Q6UWM5 242 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 C3P1Q6ZMU1 363 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 COLCA1Q6ZS62 124 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 RABL2AQ9UBK7 228 aaPredicted RBP18.3■□□□□ 0.52
PTPRF-207ENST00000436724 RABL2BQ9UNT1 228 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 MRPS28Q9Y2Q9 187 aaKnown RBP18.3■□□□□ 0.52
PTPRF-207ENST00000436724 RAXQ9Y2V3 346 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 hCG_38984A0A1B0GV85 526 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 ERVH48-1M5A8F1 160 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 GSK3AP49840 483 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 RAG2P55895 527 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 GUCA2AQ02747 115 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 RIPPLY1Q0D2K3 151 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 ST3GAL2Q16842 350 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 MDP1Q86V88 176 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 ZNF101Q8IZC7 436 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 ACBD4Q8NC06 268 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 SNAPC3Q92966 411 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 POM121L2Q96KW2 1035 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 C1orf147Q96MC9 270 aaPredicted RBP18.3■□□□□ 0.52
PTPRF-207ENST00000436724 ZNF222Q9UK12 451 aa18.3■□□□□ 0.52
PTPRF-207ENST00000436724 A0A1W2PP11 408 aa18.29■□□□□ 0.52
PTPRF-207ENST00000436724 BPNT1O95861 308 aa18.29■□□□□ 0.52
PTPRF-207ENST00000436724 NGFP01138 241 aa18.29■□□□□ 0.52
PTPRF-207ENST00000436724 RTL6Q6ICC9 239 aa18.29■□□□□ 0.52
PTPRF-207ENST00000436724 Q6ZT83 130 aa18.29■□□□□ 0.52
PTPRF-207ENST00000436724 TMEM104Q8NE00 496 aa18.29■□□□□ 0.52
PTPRF-207ENST00000436724 ELF5Q9UKW6 265 aaPredicted RBP18.29■□□□□ 0.52
PTPRF-207ENST00000436724 GMDSO60547 372 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 TOXO94900 526 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 ALDOBP05062 364 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 COX5BP10606 129 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 PRF1P14222 555 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
PTPRF-207ENST00000436724 HTR2BP41595 481 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 PER3P56645 1201 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 PLP2Q04941 152 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 C1QL2Q7Z5L3 287 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 C10orf35Q96D05 121 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 ING4Q9UNL4 249 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 MEIS3P1A6NDR6 274 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 TNFSF13O75888 250 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 FCER2P06734 321 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 TMEM255AQ5JRV8 349 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 OR2A2Q6IF42 318 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 FAM180AQ6UWF9 173 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 CD163Q86VB7 1156 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 MYPOPQ86VE0 399 aaPredicted RBP18.28■□□□□ 0.52
PTPRF-207ENST00000436724 Q8NA96 180 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 CCDC54Q8NEL0 328 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 BEST4Q8NFU0 473 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 CMBLQ96DG6 245 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 RGCCQ9H4X1 137 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 HRASLSQ9HDD0 168 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 FAM215AQ9Y5M1 114 aa18.28■□□□□ 0.52
PTPRF-207ENST00000436724 DHRS7CA6NNS2 312 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 XRCC2O43543 280 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 HLXQ14774 488 aaPredicted RBP18.27■□□□□ 0.52
PTPRF-207ENST00000436724 SFRP4Q6FHJ7 346 aaPredicted RBP18.27■□□□□ 0.52
PTPRF-207ENST00000436724 OR11H4Q8NGC9 324 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 OR6K3Q8NGY3 331 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 GIMAP1Q8WWP7 306 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 PTX4Q96A99 478 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 ZNF75AQ96N20 296 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 OR51B6Q9H340 312 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 SLC23A1Q9UHI7 598 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 RAB22AQ9UL26 194 aa18.27■□□□□ 0.52
PTPRF-207ENST00000436724 WIPF3A6NGB9 483 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 CELA3BP08861 270 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 FAM87AP0C7U9 286 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 GK2Q14410 553 aaPredicted RBP18.27■□□□□ 0.51
PTPRF-207ENST00000436724 OR8B8Q15620 311 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 CISD2Q8N5K1 135 aaKnown RBP18.27■□□□□ 0.51
PTPRF-207ENST00000436724 NAXEQ8NCW5 288 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 OR56B4Q8NH76 319 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 SPSB4Q96A44 273 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 NICN1Q9BSH3 213 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 BANF2Q9H503 90 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 ZNF391Q9UJN7 358 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 MGAT4AQ9UM21 535 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 STARD10Q9Y365 291 aa18.27■□□□□ 0.51
PTPRF-207ENST00000436724 MBD3L4A6NDZ8 208 aaPredicted RBP18.26■□□□□ 0.51
PTPRF-207ENST00000436724 MBD3L3A6NE82 208 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms