RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 DEFB108AA8MXU0 73 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 AIPO00170 330 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 SIAH2O43255 324 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 TIMM8AO60220 97 aaPredicted RBP19.69■□□□□ 0.74
CPSF4-204ENST00000436336 LILRA1O75019 489 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 IGHV3-13P01766 116 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 PRKACBP22694 351 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 ALKBH6Q3KRA9 238 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 PLCXD3Q63HM9 321 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 LYPD6Q86Y78 171 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 OR8G5Q8NG78 346 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 MCFD2Q8NI22 146 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 METTL17Q9H7H0 456 aaPredicted RBP19.69■□□□□ 0.74
CPSF4-204ENST00000436336 PPP1R3EQ9H7J1 279 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 DAPK2Q9UIK4 370 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 SLC7A11Q9UPY5 501 aa19.69■□□□□ 0.74
CPSF4-204ENST00000436336 UBR5O95071 2799 aaPredicted RBP19.68■□□□□ 0.74
CPSF4-204ENST00000436336 IGLV3-9A0A075B6K5 115 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 PLA2G2AP14555 144 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 CFPP27918 469 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 KLF3P57682 345 aaPredicted RBP19.68■□□□□ 0.74
CPSF4-204ENST00000436336 IDNKQ5T6J7 187 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 SSC4DQ8WTU2 575 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 MRPL24Q96A35 216 aaKnown RBP19.68■□□□□ 0.74
CPSF4-204ENST00000436336 KCTD12Q96CX2 325 aaKnown RBP19.68■□□□□ 0.74
CPSF4-204ENST00000436336 MMP27Q9H306 513 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 ABCB9Q9NP78 766 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 DUSP13Q9UII6 198 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 A0A075B6Q4 140 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 LOXP28300 417 aaPredicted RBP19.68■□□□□ 0.74
CPSF4-204ENST00000436336 ZNF93P35789 620 aaPredicted RBP19.68■□□□□ 0.74
CPSF4-204ENST00000436336 SELENOVP59797 346 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 DMRTC1Q5HYR2 192 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 JAGN1Q8N5M9 183 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 NPRL2Q8WTW4 380 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 PIK3IP1Q96FE7 263 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 UQCC2Q9BRT2 126 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 PLGRKTQ9HBL7 147 aa19.68■□□□□ 0.74
CPSF4-204ENST00000436336 PLCE1Q9P212 2302 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 VSTM5A8MXK1 200 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 SLC17A2O00624 439 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 SLC2A2P11168 524 aaPredicted RBP19.67■□□□□ 0.74
CPSF4-204ENST00000436336 FUT6P51993 359 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 CEACAM21Q3KPI0 293 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 C1orf100Q5SVJ3 147 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 HES5Q5TA89 166 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 LRP11Q86VZ4 500 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 ACOT12Q8WYK0 555 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 BORCS8Q96FH0 119 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 SORCS2Q96PQ0 1159 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 HIST1H2AAQ96QV6 131 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 TMEM204Q9BSN7 226 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 SLC22A4Q9H015 551 aa19.67■□□□□ 0.74
CPSF4-204ENST00000436336 CGGBP1Q9UFW8 167 aaPredicted RBP19.67■□□□□ 0.74
CPSF4-204ENST00000436336 CLPXO76031 633 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 CA6P23280 308 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 THBS2P35442 1172 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 KISS1Q15726 138 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 LHFPL2Q6ZUX7 228 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 OR6M1Q8NGM8 313 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 TRMT10AQ8TBZ6 339 aaKnown RBP19.66■□□□□ 0.74
CPSF4-204ENST00000436336 ITPKCQ96DU7 683 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 CPNE2Q96FN4 548 aaPredicted RBP19.66■□□□□ 0.74
CPSF4-204ENST00000436336 MRPL37Q9BZE1 423 aaKnown RBP19.66■□□□□ 0.74
CPSF4-204ENST00000436336 TMEM100Q9NV29 134 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 ABRACLQ9P1F3 81 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 STEAP1Q9UHE8 339 aa19.66■□□□□ 0.74
CPSF4-204ENST00000436336 J3QKU1 62 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 RBP2P50120 134 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 DYNC1I2Q13409 638 aaKnown RBP19.65■□□□□ 0.74
CPSF4-204ENST00000436336 FAM166AQ6J272 317 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 ACBD4Q8NC06 268 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 OR5A2Q8NGI9 324 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 HPSE2Q8WWQ2 592 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 OR5P3Q8WZ94 311 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 SPACA5Q96QH8 159 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 SYT3Q9BQG1 590 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 MRI1Q9BV20 369 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 C6orf62Q9GZU0 229 aaPredicted RBP19.65■□□□□ 0.74
CPSF4-204ENST00000436336 MYO18BQ8IUG5 2567 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 DOPEY1Q5JWR5 2465 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 FAM230AA0A1W2PPH8 454 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 HTR2CP28335 458 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 RIN1Q13671 783 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 ADIPOQQ15848 244 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 HS3ST6Q96QI5 342 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 GPER1Q99527 375 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 CNTD2Q9H8S5 307 aa19.65■□□□□ 0.74
CPSF4-204ENST00000436336 NOP16Q9Y3C1 178 aaKnown RBP19.65■□□□□ 0.74
CPSF4-204ENST00000436336 FLNCQ14315 2725 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 E7EQL1 145 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 PLAUP00749 431 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 ATP1B3P54709 279 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 MTCP1P56278 107 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 RAB11BQ15907 218 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 MOGQ16653 247 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 MZT2AQ6P582 158 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 CRIP3Q6Q6R5 217 aa19.64■□□□□ 0.73
CPSF4-204ENST00000436336 MEX3BQ6ZN04 569 aaKnown RBP19.64■□□□□ 0.73
CPSF4-204ENST00000436336 PNLDC1Q8NA58 520 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms