RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ARHGAP5-AS1Q96IT6 56 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 SEC22AQ96IW7 307 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 JSRP1Q96MG2 331 aaPredicted RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 GNRHR2Q96P88 292 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 ZNF385AQ96PM9 386 aaKnown RBP9.16□□□□□ -0.94
CD44-210ENST00000434472 RAB18Q9NP72 206 aa9.16□□□□□ -0.94
CD44-210ENST00000434472 CACNA1EQ15878 2313 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 A0A0J9YW62 118 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 RNF222A6NCQ9 220 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 OR5H15A6NDH6 313 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 FOXI3A8MTJ6 420 aaPredicted RBP9.15□□□□□ -0.94
CD44-210ENST00000434472 LAMTOR5O43504 91 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 RAD51DO75771 328 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 CRHP06850 196 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 FCGR2AP12318 317 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 CCL4P13236 92 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 PRKACBP22694 351 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 SCRN3Q0VDG4 424 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 ZNF528Q3MIS6 628 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 RNF144BQ7Z419 303 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 PEG10Q86TG7 708 aaKnown RBP9.15□□□□□ -0.94
CD44-210ENST00000434472 ZIC4Q8N9L1 334 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 CSNK2A3Q8NEV1 391 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 OR2I1PQ8NGU4 316 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 SPSB1Q96BD6 273 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 LINC00052Q96N35 136 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 ARPC5LQ9BPX5 153 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 PECRQ9BY49 303 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 CHMP1AQ9HD42 196 aaPredicted RBP9.15□□□□□ -0.94
CD44-210ENST00000434472 PLEK2Q9NYT0 353 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 ZNF391Q9UJN7 358 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 PIGLQ9Y2B2 252 aa9.15□□□□□ -0.94
CD44-210ENST00000434472 CABIN1Q9Y6J0 2220 aa9.15□□□□□ -0.95
CD44-210ENST00000434472 TRBV6-7A0A0A0MS04 114 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 IGHV3-15A0A0B4J1V0 119 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 C19orf67A6NJJ6 358 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 FIGNL2A6NMB9 653 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 POM121CA8CG34 1229 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 EEF1E1-BLOC1S5C9J1V9 151 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 STMND1H3BQB6 276 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 BET1O15155 118 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 RLN2P04090 185 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 BLVRBP30043 206 aaPredicted RBP9.14□□□□□ -0.95
CD44-210ENST00000434472 AVPR2P30518 371 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 SERPINF1P36955 418 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 CNN3Q15417 329 aaKnown RBP9.14□□□□□ -0.95
CD44-210ENST00000434472 LHFPL1Q86WI0 220 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 GPR137CQ8N3F9 429 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 LRRC18Q8N456 261 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 SEMA6DQ8NFY4 1073 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 MAFAQ8NHW3 353 aaPredicted RBP9.14□□□□□ -0.95
CD44-210ENST00000434472 CPT1CQ8TCG5 803 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 RHBDD1Q8TEB9 315 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 EMG1Q92979 244 aaKnown RBP9.14□□□□□ -0.95
CD44-210ENST00000434472 LIN37Q96GY3 246 aaPredicted RBP9.14□□□□□ -0.95
CD44-210ENST00000434472 UCN2Q96RP3 112 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 ZNF471Q9BX82 626 aaPredicted RBP9.14□□□□□ -0.95
CD44-210ENST00000434472 METTL9Q9H1A3 318 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 FN3KRPQ9HA64 309 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 EDARQ9UNE0 448 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 OSGIN2Q9Y236 505 aa9.14□□□□□ -0.95
CD44-210ENST00000434472 MRPS18CQ9Y3D5 142 aaKnown RBP9.14□□□□□ -0.95
CD44-210ENST00000434472 C13orf42A0A1B0GVH6 325 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 F5H0A9 414 aaPredicted RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 TNFSF11O14788 317 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 SMAD9O15198 467 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 RRP8O43159 456 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 SGCEO43556 437 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 FAHP16930 419 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 NPY4RP50391 375 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 LUMP51884 338 aaPredicted RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 SNU13P55769 128 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 CARD18P57730 90 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 NAAAQ02083 359 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 UBE2V2Q15819 145 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 RSPO1Q2MKA7 263 aaPredicted RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 CHRFAM7AQ494W8 412 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 PDSS1Q5T2R2 415 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 MOB3CQ70IA8 216 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 SULF2Q8IWU5 870 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 STPG2Q8N412 459 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 OR5AP2Q8NGF4 316 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 OR10K1Q8NGX5 313 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 OR13G1Q8NGZ3 307 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 OR14L1PQ8NHC6 308 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 TMEM230Q96A57 120 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 ZC3H10Q96K80 434 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 CDX2Q99626 313 aaPredicted RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 ST6GALNAC5Q9BVH7 336 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 SHARPINQ9H0F6 387 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 MBD2Q9UBB5 411 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 C14orf166Q9Y224 244 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 MEMO1Q9Y316 297 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 PHF3Q92576 2039 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 TEX13DA0A0J9YY54 714 aaPredicted RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 A0A1W2PP11 408 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 E9PLN8 166 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 GDF9O60383 454 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms