RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TM2D1Q9BX74 207 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 CDCP1Q9H5V8 836 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 GAREM1Q9H706 876 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 DUX4Q9UBX2 424 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 CGGBP1Q9UFW8 167 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 KCNN3Q9UGI6 736 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 KLK13Q9UKR3 277 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 NUP50Q9UKX7 468 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 POLR1DQ9Y2S0 133 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 HS3ST3B1Q9Y662 390 aa6.54□□□□□ -1.36
COL17A1-204ENST00000433822 PHF3Q92576 2039 aaKnown RBP6.54□□□□□ -1.36
COL17A1-204ENST00000433822 KIAA1549Q9HCM3 1950 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 A0A1W2PPL8 197 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 MTRF1O75570 445 aaKnown RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 DUS4LO95620 317 aaKnown RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 QDPRP09417 244 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 NAT2P11245 290 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 MYF5P13349 255 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 HIST1H1DP16402 221 aaKnown RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 MGMTP16455 207 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 CXCL2P19875 107 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 NME2P22392 152 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 ACP1P24666 158 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 SRD5A2P31213 254 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 NTF4P34130 210 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 CASRP41180 1078 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 CX3CR1P49238 355 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 H2BFSP57053 126 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF121P58317 390 aaPredicted RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 RAC3P60763 192 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 RPS27AP62979 156 aaKnown RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 UBA52P62987 128 aaKnown RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 SURF2Q15527 256 aaPredicted RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 TAF13Q15543 124 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 GFOD2Q3B7J2 385 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM176BQ3YBM2 270 aaPredicted RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 NRN1LQ496H8 165 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 LY6G6FQ5SQ64 297 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 RIPPLY2Q5TAB7 128 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 FAM27BQ5VT28 67 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 LCN10Q6JVE6 187 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 FAAP20Q6NZ36 180 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 DBX2Q6ZNG2 339 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF627Q7L945 461 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 LYG2Q86SG7 212 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 LURAP1LQ8IV03 231 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 WDFY1Q8IWB7 410 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 ZNF100Q8IYN0 542 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 OR8H3Q8N146 312 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 BEST3Q8N1M1 668 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 GALNT16Q8N428 558 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 PNLDC1Q8NA58 520 aaKnown RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 TMEM185AQ8NFB2 350 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 STEAP2Q8NFT2 490 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 OR52N4Q8NGI2 321 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 OR4D10Q8NGI6 311 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 OR52H1Q8NGJ2 320 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 MITD1Q8WV92 249 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 PHYHIPLQ96FC7 376 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 FOXN4Q96NZ1 517 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 CDC6Q99741 560 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 EMC6Q9BV81 110 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 DPCDQ9BVM2 203 aaPredicted RBP6.53□□□□□ -1.36
COL17A1-204ENST00000433822 CHST5Q9GZS9 411 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 CST11Q9H112 138 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 DNTTIP1Q9H147 329 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 LPAR5Q9H1C0 372 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 BEX1Q9HBH7 125 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 PROK2Q9HC23 129 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 OCIAD1Q9NX40 245 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 ATPIF1Q9UII2 106 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 PIEZO2Q9H5I5 2752 aa6.53□□□□□ -1.36
COL17A1-204ENST00000433822 COL27A1Q8IZC6 1860 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 NSG1A0A0A6YYJ2 146 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TMEM235A6NFC5 223 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 WIPF3A6NGB9 483 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 FOXI3A8MTJ6 420 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 SERPINE3A8MV23 424 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 MFNGO00587 321 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 DHHO43323 396 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 ZIC3O60481 467 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 DHRS3O75911 302 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 STK17BO94768 372 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 HPP00738 406 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 FCER2P06734 321 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 CST2P09228 141 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF35P13682 527 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 FOLR3P41439 243 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF84P51523 738 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TAS2R46P59540 309 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 CYCSP99999 105 aaKnown RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 DHRS2Q13268 280 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 ENDOGQ14249 297 aaKnown RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 HLXQ14774 488 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 KRTAP27-1Q3LI81 207 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 MOGAT2Q3SYC2 334 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 CDNFQ49AH0 187 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 C4orf46Q504U0 113 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms