RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 YEATS4O95619 227 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 PTHP01270 115 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 CTSLP07711 333 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 TPM1P09493 284 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 OR56A5P0C7T3 313 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 MAGP20916 626 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 CARD18P57730 90 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 TAS2R46P59540 309 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 SLC39A6Q13433 755 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 C5orf64Q2M2E5 130 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 HNRNPA1L2Q32P51 320 aaKnown RBP3.86□□□□□ -1.79
USP54-206ENST00000433394 ZNF829Q3KNS6 432 aaPredicted RBP3.86□□□□□ -1.79
USP54-206ENST00000433394 PRMT9Q6P2P2 845 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 SLC35D2Q76EJ3 337 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 ARHGAP18Q8N392 663 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 KIF2BQ8N4N8 673 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 OR6K6Q8NGW6 343 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 SYNPRQ8TBG9 265 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 ASZ1Q8WWH4 475 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 CIDECQ96AQ7 238 aaPredicted RBP3.86□□□□□ -1.79
USP54-206ENST00000433394 DYNLL2Q96FJ2 89 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 LINC00167Q96N53 147 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 COL21A1Q96P44 957 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 SCGB3A2Q96PL1 93 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 SLIRPQ9GZT3 109 aaKnown RBP3.86□□□□□ -1.79
USP54-206ENST00000433394 TOLLIPQ9H0E2 274 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 GAL3ST2Q9H3Q3 398 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 RGS18Q9NS28 235 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 HES2Q9Y543 173 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 MROH7Q68CQ1 1323 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 PARP4Q9UKK3 1724 aaKnown RBP3.86□□□□□ -1.79
USP54-206ENST00000433394 JCADQ9P266 1359 aa3.86□□□□□ -1.79
USP54-206ENST00000433394 PLCH1Q4KWH8 1693 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 PKD1L3Q7Z443 1732 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 IGHV1-69DA0A0B4J2H0 117 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 H3BN98 237 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 ZBTB5O15062 677 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 RAD51BO15315 384 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 CHST10O43529 356 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 CRYGCP07315 174 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 CD37P11049 281 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 PTNP21246 168 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 TUBG1P23258 451 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 BMI1P35226 326 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 PPICP45877 212 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 SERPINB8P50452 374 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 PSMC5P62195 406 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 MADCAM1Q13477 382 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 C16orf72Q14CZ0 275 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 TSC22D1Q15714 1073 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 SNRNP35Q16560 246 aaKnown RBP3.85□□□□□ -1.79
USP54-206ENST00000433394 FBXW9Q5XUX1 488 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 CEMP1Q6PRD7 247 aaPredicted RBP3.85□□□□□ -1.79
USP54-206ENST00000433394 TMPRSS11AQ6ZMR5 421 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 OR2W3Q7Z3T1 314 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 LINC00469Q8N7U9 141 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 RERGQ96A58 199 aaPredicted RBP3.85□□□□□ -1.79
USP54-206ENST00000433394 PTX4Q96A99 478 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 FAM131CQ96AQ9 280 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 STARD4Q96DR4 205 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 SGTBQ96EQ0 304 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 RNF145Q96MT1 663 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 STMN4Q9H169 189 aaPredicted RBP3.85□□□□□ -1.79
USP54-206ENST00000433394 FBXO44Q9H4M3 255 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 TUBG2Q9NRH3 451 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 UBAP1Q9NZ09 502 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 NOSIPQ9Y314 301 aaKnown RBP3.85□□□□□ -1.79
USP54-206ENST00000433394 COMMD3-BMI1R4GMX3 469 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 KIAA0232Q92628 1395 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 MAP3K5Q99683 1374 aa3.85□□□□□ -1.79
USP54-206ENST00000433394 LRRC37A3O60309 1634 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 ADAMTS7Q9UKP4 1686 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.84□□□□□ -1.79
USP54-206ENST00000433394 DENND4AQ7Z401 1863 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 SNAI2O43623 268 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 SPOPO43791 374 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 RAD1O60671 282 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 CTDNEP1O95476 244 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 ETHE1O95571 254 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 TGM6O95932 706 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 CSTAP01040 98 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 PGA5P0DJD9 388 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 CPN2P22792 545 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 PCK1P35558 622 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 PPOXP50336 477 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 FAM71E1Q6IPT2 247 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 KRT222Q8N1A0 295 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 OR13C9Q8NGT0 318 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 TCP10LQ8TDR4 215 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 C15orf40Q8WUR7 153 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 RNF157Q96PX1 679 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 TEAD3Q99594 435 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 CRB1P82279 1406 aa3.84□□□□□ -1.79
USP54-206ENST00000433394 RGPD5Q99666 1765 aa3.84□□□□□ -1.8
USP54-206ENST00000433394 LOC100653049A0A140TA62 436 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 TMEM223A0PJW6 202 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ZNF99A8MXY4 864 aaPredicted RBP3.83□□□□□ -1.8
USP54-206ENST00000433394 DNASE2O00115 360 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms