RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 FOXB1Q99853 325 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 IGKV1-27A0A075B6S5 117 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 FXYD6-FXYD2A0A087WZ82 144 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 H3BUI4 141 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 MFNGO00587 321 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 ANGPTL7O43827 346 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
RFTN1-203ENST00000432519 NAT2P11245 290 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 CAPZA1P52907 286 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 SORDQ00796 357 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 TGIF1Q15583 401 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 C12orf45Q8N5I9 185 aaPredicted RBP12.79□□□□□ -0.36
RFTN1-203ENST00000432519 FXYD6Q9H0Q3 95 aa12.79□□□□□ -0.36
RFTN1-203ENST00000432519 LEUTXA8MZ59 168 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 M0R233 179 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 MGMTP16455 207 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 LHX2P50458 406 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 OR1C1Q15619 314 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 ABHD17BQ5VST6 288 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 OR2W3Q7Z3T1 314 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 OR51T1Q8NGJ9 327 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 OR1F12Q8NHA8 337 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 RADILQ96JH8 1075 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 WNT5BQ9H1J7 359 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 SLC2A8Q9NY64 477 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 TRAV14DV4A0A0A6YYC5 116 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 CYTIPO60759 359 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 TNFSF15O95150 251 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 LCATP04180 440 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 THBS4P35443 961 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 HTR5AP47898 357 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 SEC61A1P61619 476 aaKnown RBP12.78□□□□□ -0.36
RFTN1-203ENST00000432519 RPS27AP62979 156 aaKnown RBP12.78□□□□□ -0.36
RFTN1-203ENST00000432519 RAB35Q15286 201 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 STEAP2Q8NFT2 490 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 OR4K15Q8NH41 348 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 CPT1CQ8TCG5 803 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 MARCH1Q8TCQ1 289 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 ST8SIA4Q92187 359 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 SPTSSAQ969W0 71 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 REEP6Q96HR9 211 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 SEC22AQ96IW7 307 aa12.78□□□□□ -0.36
RFTN1-203ENST00000432519 ELL3Q9HB65 397 aaPredicted RBP12.78□□□□□ -0.36
RFTN1-203ENST00000432519 ZNF107Q9UII5 783 aaPredicted RBP12.78□□□□□ -0.36
RFTN1-203ENST00000432519 OR6C6A6NF89 314 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 FOXI3A8MTJ6 420 aaPredicted RBP12.77□□□□□ -0.36
RFTN1-203ENST00000432519 DISC1C4P0D8 188 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 ZNF587BE7ETH6 402 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 L7N2F9 121 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 MSTNO14793 375 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 SPRY1O43609 319 aaPredicted RBP12.77□□□□□ -0.36
RFTN1-203ENST00000432519 CHRM2P08172 466 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 ZNF24P17028 368 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 PI3P19957 117 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 ZBTB25P24278 435 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 MEF2DQ14814 521 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 OR10A2Q9H208 303 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 UPB1Q9UBR1 384 aa12.77□□□□□ -0.36
RFTN1-203ENST00000432519 SDCBPO00560 298 aaPredicted RBP12.77□□□□□ -0.37
RFTN1-203ENST00000432519 CST2P09228 141 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 PPP3CBP16298 524 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 OR3A3P47888 321 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 CLDN18P56856 261 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 TMEM164Q5U3C3 297 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 Q6ZSR3 168 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 GALNTL5Q7Z4T8 443 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 FAM89BQ8N5H3 189 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 CPEB3Q8NE35 698 aaKnown RBP12.77□□□□□ -0.37
RFTN1-203ENST00000432519 FNDC9Q8TBE3 224 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 HAS2Q92819 552 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 PRRT1Q99946 306 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 HDHD3Q9BSH5 251 aaPredicted RBP12.77□□□□□ -0.37
RFTN1-203ENST00000432519 ST6GALNAC5Q9BVH7 336 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 TTTY12Q9BZ98 90 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 SLC7A10Q9NS82 523 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 B3GNT2Q9NY97 397 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
RFTN1-203ENST00000432519 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 A0A096LPE4 126 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 A0A1W2PPZ6 126 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 AKR1C4P17516 323 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-203ENST00000432519 BAMBIQ13145 260 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 SLC16A14Q7RTX9 510 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 C6orf201Q7Z4U5 140 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 SLC25A42Q86VD7 318 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 CPNE4Q96A23 557 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-203ENST00000432519 FAM173AQ9BQD7 235 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 OR2H1Q9GZK4 316 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 CLEC4MQ9H2X3 399 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-203ENST00000432519 BOKQ9UMX3 212 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-203ENST00000432519 NOP16Q9Y3C1 178 aaKnown RBP12.76□□□□□ -0.37
RFTN1-203ENST00000432519 FAM230AA0A1W2PPH8 454 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 HPNP05981 417 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 CCL2P13500 99 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 GSK3AP49840 483 aa12.76□□□□□ -0.37
RFTN1-203ENST00000432519 AP2S1P53680 142 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF92Q03936 586 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms